Trichechus manatus latirostris (Florida manatee): 101361544
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Entry
101361544 CDS
T05135
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03030
DNA replication
tmu03410
Base excision repair
tmu03420
Nucleotide excision repair
tmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101361544
03410 Base excision repair
101361544
03420 Nucleotide excision repair
101361544
03430 Mismatch repair
101361544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmu03032
]
101361544
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101361544
DNA replication proteins [BR:
tmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101361544
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101361544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
Rad17
AAA_14
RuvB_N
BRCT_2
AAA_17
AAA_33
AAA_7
nSTAND3
AAA_16
AAA_18
AAA_30
Zeta_toxin
RNA_helicase
AAA_19
NTPase_1
Motif
Other DBs
NCBI-GeneID:
101361544
NCBI-ProteinID:
XP_023594707
UniProt:
A0A2Y9RJT3
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MNFLFCFQDIRKFFGVIPSGKKLLNETVKKNEKTKSTEETLKAKKGIKEIKVNSSCRDDD
FKQKQPNKKKRIIYDSDSESEETVQVKNAKKQPEKMPLSSKPGKILRKDPVTYISETDEE
DDLMYKKTAFKSKDNGGSANSYLGESNMKKNEENTKTKNKPLSPVKLTPTSVLDYFGTGS
IQRSDKKMVASKRKKPSKNTDDFRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLD
EEPKTKKIRKDQEEKETSLSVQANLSKTEKHKYPHKVKTEQFSDERKNCSPKKQTKCESS
KESEQHSKLSAHRRGEPSPTKASSKLALLKKKEKSSYQEAEPMGSKKKENAIELKGETKT
PKKTRSSPTKKESTSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFV
ITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDED
GLLNLIRTMPGKKSKYEIAVEAEMKKEKSKLERTPQKTDQGKRKISPNKKDSESKKSKLT
PKRGGSLKSVKKEPSVFQKGLDFEEQVAEETSVDSGARNLTDDSSGHKVESLLWVDKYKP
TSLKTIIGQQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGP
PGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVSESLNNTSIKGFYSGGAVHSAS
TRHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRF
QRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKALTYDQ
AKADSSRAKKDIKLGPFDVARKVFAAGEETAHMSLMDKLDLFFHDYSIAPLFVQENYVHV
KPIAAGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGY
MTQFPTFPSWLGKYSSTGKHDRVVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLAS
QGAEGVQAVVAFMDTYYLMKEDFDNIMELSSWGGKPSPFSKLDPKVKAAFTRAYNKEAHL
TPYSLQAIKISRRSTGPVLDSEYNEELNEEDSQFDEKDQDSVETDAMIKKKTKSSKPSKS
EKDKESKKGKGKSLKK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcttttttgttttcaggatattcggaaattctttggggttataccaagtgga
aagaaacttctaaatgaaacagtaaagaagaatgagaaaacaaagtctactgaagaaact
ttaaaagcaaagaaaggaataaaggaaatcaaggtaaatagttcttgcagagatgatgac
ttcaaacagaaacagccaaacaagaaaaagaggatcatctatgattcagattcagaatca
gaggagacagtgcaggttaaaaatgccaaaaagcaaccagaaaaaatgccattgtcttct
aaacctggtaaaattctacgaaaggatcctgttacatacatttcagaaacagatgaagaa
gatgaccttatgtataagaagacagcttttaaatcgaaagacaatggaggatctgcaaat
agttatcttggagagtcaaacatgaaaaagaatgaagaaaatactaagaccaagaataag
cctttatctcctgtaaaacttacacccacatcagtgcttgattattttggaactggaagt
atccaaagatcagataagaagatggtggcaagcaaaagaaaaaagccttcgaaaaataca
gatgatttcagattaaatgatgaagccatcgccaagcaattgcaacttgatgaagatgca
gagttggagaggcagctgcatgaggatgaagagtttgccagaacgttggccatgttggat
gaagaacccaagaccaaaaagattcgaaaggaccaagaagagaaagaaacgtctttgtct
gtccaagccaatttaagtaaaacagaaaaacataaatatcctcataaagtaaaaacagaa
caattttcagatgaaagaaagaactgtagtcctaagaaacaaactaaatgtgaaagttca
aaagaatctgagcaacattctaagttatcagctcacagaagaggagaaccctctcctaca
aaggccagttctaagctggcacttttgaaaaaaaaagaaaagagttcttatcaagaagca
gagccaatgggctcaaaaaaaaaagaaaatgctattgaactgaaaggagaaacaaaaact
cctaagaaaaccagaagttctccaactaaaaaagagtctacaagtcctgaagattcggaa
aagaaacgcactaattatcaagcttatcgaagctacctaaatcgagaaggtcccaaagct
ctgggctccaaagaaataccaaagggagctgaaaattgcttggaaggcctgatatttgta
atcacaggagtgctggagtccattgaacgagatgaggccaagtctctaattgagcgttat
ggggggaaagtaaccggaaatgtcagcaagaaaacaaactaccttgtcatgggtcgggat
agtggacagtccaagagtgataaggcagcagccttgggaacaaaaattattgacgaagat
ggcttattgaatctgattcgaactatgccaggcaagaagtccaagtatgaaatagcagtt
gaagctgagatgaagaaagaaaagtccaaattggagagaacaccccaaaaaactgaccaa
ggaaaaagaaaaattagtccaaataagaaggactcagaatctaaaaagagcaagctgact
cccaaaaggggcggctctttaaagtcagtaaaaaaggaaccgagtgtgtttcagaaaggc
ctggactttgaggagcaggtggctgaggaaacaagtgttgacagtggggctaggaatttg
actgatgacagcagtggacacaaagtggaaagtttgctctgggtggataaatataagcca
acttcgctcaagaccataattggacagcagggtgaccagagctgtgccaacaaactccta
cgctggcttcagaactggcacaagagtccatccgaagataaaaaacacgcagcaaagttt
ggtaaatttgccggcaaagatgatggctctagttttaaagcagcactgctctccggccct
ccaggtgttggcaaaaccaccacagcttccctggtttgtcaggagttgggatatagctat
gtagaactgaatgcaagcgacactaggagtaaaaacagtttgaaggagattgtttctgaa
tcactgaataataccagcatcaaaggcttttattcaggtggcgccgtccattcagcaagc
accagacacgctctcatcatggatgaggtggacggcatggcaggcaatgaggacagggga
ggaattcaggagttaattggcctgataaaacatacaaaaattcccattatttgcatgtgc
aatgacagaaatcatccgaagattcgctctttggttcattattgttttgatcttcgtttt
caaagacctcgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggt
ttaaagattccccctccagctatgaatgaaataattttgggagctaatcaagatatcaga
caggttttgcacaatctgagtatgtggtgtgcacagagtaaagcactaacctatgaccag
gccaaggctgattctagtagagccaaaaaggacataaagctgggaccatttgatgttgcc
cggaaagtatttgcagctggagaggagactgctcatatgtcacttatggacaaattggat
ctcttttttcatgattattcaatagcccccctctttgtccaggagaactatgtacatgtg
aagcctatagccgcagggggcgacatgaagaagcacttgatgctgttgagcagagcagcg
gatagtatatgcgacggtgacctagtggatagtcagatccgcagtaaacaaaactggagc
cttctgcccacacaggccatttatgccagtgttcttcctggagagttaatgagggggtac
atgactcagtttcccacctttccaagctggctgggcaagtactcatctacaggcaaacat
gatcgtgttgttcaggacctagcgttgcacatgagtctcagaacgtactccagcaaaagg
accgtaaacatggattatctgtcacacataagggatgcacttgtacaacccttggcctca
caaggggcagaaggagtgcaggctgttgttgcattcatggacacatattatttgatgaaa
gaagactttgataatatcatggaacttagcagctggggaggcaaacctagtcctttttcc
aagctggatcccaaggtcaaagcagccttcacgagagcttacaataaggaagcccacctt
actccgtattcacttcaggcaataaagatatctagacgcagcacaggtccagtgctagat
tctgaatacaatgaagagttaaatgaagaagactctcagtttgatgagaaagaccaagat
tctgtggaaaccgatgctatgatcaagaaaaagacaaaatcttcaaagccttcaaaatca
gaaaaagataaggagtccaaaaaaggaaaaggaaaaagtttgaagaaatga
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integrated database retrieval system
