Trichechus manatus latirostris (Florida manatee): 101361634
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Entry
101361634 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38 isoform X1
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101361634
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101361634
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101361634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
U-box
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-RING_10
zf-RING_5
Trm112p
zf-Nse
zf-RING_4
RDM
zf-4CXXC_R1
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
101361634
NCBI-ProteinID:
XP_004384098
UniProt:
A0A2Y9RI66
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MASATPAKKMKEEATCSICLNLMVDPVSISCGHSYCRLCIEGFLENVSHTQPQQEFLCPQ
CRAPFQMASLRPNKQLGNLIEAIKEINCEMVCEEHGEQLHLFCEDDGQLICWRCERAPQH
KGHTTALVEDVSQGYKEKLQKVVTNLRQLNNECMNLKALTTKQISEWKEKVEVQRKKLQS
DFQNLQIFLHEEEKCCLWRLEREEEQTLRRLKDSEENLELKSCELMSYLLDLEDKCQGSP
QELLLDVKDTLNRSWAVKLETPEALSLELNTVYSVPELYFDVKKMLRSYQVGVTLDPDTA
HRELILSEDRRQVTRGYPQDNLDTSSRRFSAFPCVLGCEGFTSGRHYFEVDVGEGTGWDL
GVCIENVQRDKSMKQKPEFGFWTIRLCKKKGYIALTSLPVYLHLKEQPLVVGVLLDCEAG
VVSFYNMTTGSHIFTFPKASFSDTLRPYFQVYQYSPLFLPPPDEEGKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccacacctgcaaaaaagatgaaagaggaagccacctgctccatctgccta
aacttgatggttgacccagtgagcatcagctgtggacacagctactgccggttatgcata
gagggcttccttgagaacgtaagccacacgcaaccacagcaagagttcttatgtccccag
tgccgggccccctttcaaatggcaagcctcaggcccaacaagcagctaggaaacctcatt
gaggccatcaaggagataaactgtgaaatggtatgtgaagaacacggagagcagctccac
ctgttctgcgaagacgacggccagctcatctgctggcgctgtgagcgggcaccgcagcac
aaagggcacaccacagctcttgttgaagatgtaagccaggggtacaaggaaaagcttcag
aaagttgtgacaaacttgaggcaactcaacaatgaatgtatgaatctgaaggcattgacg
acaaagcaaataagcgaatggaaggaaaaggtagaggttcagagaaaaaaattacagtct
gactttcagaatctccaaattttcttgcatgaagaggagaaatgttgtctctggaggctg
gagagagaagaagaacagactctaaggagactgaaggacagtgaggaaaatctggagctg
aagagctgtgaacttatgagctacctcctggatctggaggataaatgtcagggctcaccc
caggaattgttactggatgtgaaggacactttgaacaggagttgggctgtgaagctagaa
acaccagaagccctctctttggagcttaacactgtgtacagcgttcctgaactttacttt
gatgtgaagaaaatgctaagaagctatcaagtcggtgtgactctggatccagatacagct
catcgtgaactaattctgtctgaggatcggagacaagtgactcgtggatacccccaggac
aatcttgacacttcttccaggagatttagtgccttcccatgtgtcctgggctgtgagggc
ttcacctcaggaagacactactttgaagtagatgtgggagaaggaactgggtgggattta
ggagtctgtatagaaaatgtgcagagagacaagagcatgaagcagaagcctgagtttgga
ttctggaccatcaggctgtgcaaaaagaaaggctatatagcacttacctctctcccagtt
taccttcatctgaaggagcagcccctggttgtaggggttttactggactgtgaagctgga
gttgtatccttttataacatgaccactggctcccacatattcaccttcccaaaggcctcc
ttctctgacactctccggccctatttccaagtttatcaatactctcctttgttcctacct
cccccagatgaggaaggaaagaagtaa
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