Trichechus manatus latirostris (Florida manatee): 101361643
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Entry
101361643 CDS
T05135
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tmu01001
]
101361643
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101361643
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101361643
Protein kinases [BR:
tmu01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
101361643
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101361643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
YaaC
Motif
Other DBs
NCBI-GeneID:
101361643
NCBI-ProteinID:
XP_023596966
UniProt:
A0A2Y9RTM3
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MSTEKCFQAGGGGVEVKKFPGKDERRENAGYWGVAFIAWGGAGRSAEGAWQGTRKRREGS
GAGPEFGGPGAGAGTKAGAGTKLCNTPCPEGNKRHSWPSGRTPHRQRHVRLWWWWWDRQR
PSFRPRTLSGPRLNVCALGGSGLGSRTLLASRILQEVPSTCRRVSNRRPQDPRVQRQAPS
SCALRSLRKGQRPTPSGVSIPGASLRVVFRQDFPYIPKAAAASDPTSGPHGAQGACAEAS
APVISVPPPGRGSFCERARGRAVVRVERDALELLEHCGLCRERLRPEREPRLLPCLHSAC
SACLGPAAPTASNSSGDGGAAGDSAVVDCPVCKQQCFYKDIVENYFMRDSGSKAATDTQD
ANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPAKTRDGERTVY
CSVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHA
TLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERL
ERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGE
MKFQWDLNAWTKSAEAFGKIVAERSGTNSTGPAPMAPPRAPGPLSKQGSGSSQPMEVQEG
YGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGLMRKVPRVSLERLDLDLTADSQPPVFKVF
PGNTTEDYNLIVIERGGAAAAAGQPGTAPPGAPGAPPLPGMAIVKEEETEAAIGAPPAAA
EGPETKPVLMALAEGSGAEGPRLASPSGSTSSGLEVVAPEGASAPSGGPGALDDSATICR
VCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLNLDESDT
TGVVAKLSPANQRKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTLDLTLIRARLQE
KLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNEAFGDTKFSAVL
VEPPPLSLPGAGLGAPELPGGPSDGL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgagaaatgctttcaggctggaggcggaggggtggaggtgaagaagttccct
ggcaaggatgagaggagagaaaacgccggctactggggcgtggccttcatcgcatggggt
ggagccgggcgctctgcggagggggcgtggcaggggacaaggaagcgcagagaagggagc
ggggcggggcccgaatttggggggccgggcgctggggctggaacaaaggcaggggcggga
acaaagctctgcaacaccccatgcccggaggggaacaaaaggcactcctggcccagtggc
cggacgcctcaccgccagcgccacgtgcgcctgtggtggtggtggtgggatagacagcgc
ccctcgttccgccccaggactctgtccggcccccgccttaacgtgtgcgcacttgggggg
tccggcctgggctctcggaccctgctggcctcccgcatcctccaggaagtcccctcaacc
tgccgtagggtttcgaaccggaggcctcaggacccgagggtacagaggcaggccccgtcc
tcatgcgcgctgcggtcactgcgcaaggggcaacggcccactcccagcggcgtgtccatc
cctggtgcttccttgcgcgttgtcttcagacaggatttcccctacatccccaaggctgcg
gccgcctcagaccccacctccgggccgcacggcgcccagggcgcgtgcgcggaggcgtcg
gcgccagttatttctgtcccgccccccggccgcggctctttctgcgagcgggcgcgcggg
cgagcggtcgtgcgcgtggagcgggacgcgctggagctgctggagcactgcggcctgtgt
cgcgagcgcctgcggccggagcgggagccgcgcctgctgccctgcctgcactcggcctgc
agtgcctgcctcgggcccgccgcgcccaccgcctctaacagctcgggagacggcggcgcg
gcgggggacagcgcggtggtggactgccctgtgtgcaagcagcagtgcttctacaaagac
atcgtggagaactactttatgcgtgacagtggcagcaaggccgccaccgacacccaggat
gctaatcagtgctgcaccagctgtgaggataatgcacccgccaccagctactgtgtggaa
tgctccgaaccgctttgtgagacgtgtgtggaggcacaccagcgggtgaagtacaccaag
gaccacactgtgcgatccaccgggccggccaagacgcgggacggcgagcgcactgtgtac
tgcagcgtacacaagcatgagcccctcgtgctgttttgcgagagctgcgacacccttacc
tgccgggactgccagctcaatgcccacaaggaccaccagtaccagttcctggaggacgcg
gtgaggaaccagcgcaagctcctggcctcattggtgaagcgccttggggataagcatgca
acactgcagaagagcaccaaggaggttcgcagctcgatccgccaggtgtcagacgtgcag
aagcgtgtgcaggtggatgtcaagatggccatcctgcagatcatgaaggagctgaacaag
cggggtcgtgtactggtcaatgatgcccagaaggtgactgaggggcagcaggagcggctg
gagcggcagcactggaccatgaccaagatccagaagcaccaggagcacatcctgcgcttt
gcctcctgggccctggagagtgacaacaacacggccctgctgctgtccaaaaagctgatc
tacttccagctgcaccgtgccctcaagatgattgtggaccctgtggagccacatggcgag
atgaaattccagtgggacctcaacgcctggaccaagagtgctgaggccttcggcaaaatc
gtggcagagcgctcgggcaccaactccacaggtcctgcacccatggctcccccacgggcc
ccgggcccactgagcaagcagggctcaggcagcagccagcccatggaggtacaggaaggc
tatggctttgggtcagatgatccctactccagtgcagagcctcatgtatcgggtgtaaaa
cggtcccgctctggtgagggtgaggtgagcggcctaatgcgcaaggtgccacgggtgagc
ctcgagcgcctggacttggacctcacagccgacagccagccgcctgtgttcaaggtattc
ccaggcaacaccacagaggactacaatctcattgtcatcgagcgtggtggtgctgccgcg
gctgccggccagcccggaactgcgccccctggggcccctggagccccgcccctgcccggc
atggccattgttaaggaagaagagacagaggcagccattggtgccccacctgctgctgct
gaaggccccgagaccaagcccgtgctgatggccctggcagagggttctggtgcagagggc
ccccgcctggcctcacccagtggtagcaccagttcgggcctggaagtggtggcccctgaa
ggtgcctcggctccatctggcggcccaggtgccctggacgacagtgccaccatctgtcgt
gtctgtcagaagccaggcgacctggtcatgtgcaaccagtgcgagttttgcttccacctg
gactgccacctgccagctctgcaggatgtgccaggggaagagtggagctgctcactctgc
cacgtgctgcctgacctgaaggaggaggacgggagcctcaacctggatgagtccgacacc
actggtgtggtggccaagctttcgccagccaaccagcggaagtgtgagcgtgtcctgctg
gccctgttctgccatgagccgtgccgccccctgcaccagttggccactgactccaccttc
tccctggaccagcctggtggcaccctggacctgacgctgatccgtgcccgtctccaggag
aaattgtcgcctccctacagctccccccaggaatttgcccaggatgtgggccgcatgttc
aagcagttcaacaagctgacagaggacaaggcagacgtgcagtccatcattggcctgcaa
cgcttttttgagacgcgcatgaatgaagcttttggtgacaccaagttctcagccgtgttg
gtcgagcccccgccgctgagcctacctggtgctggcctgggagcccccgagttgcccggc
ggccccagtgatggcctctga
DBGET
integrated database retrieval system
