Trichechus manatus latirostris (Florida manatee): 101361864
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Entry
101361864 CDS
T05135
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101361864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101361864
Enzymes [BR:
tmu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
101361864
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101361864
mRNA degradation factors
5'-3' decay
Decapping complex
101361864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
101361864
NCBI-ProteinID:
XP_004377045
UniProt:
A0A2Y9DLS7
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
METKRVEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGV
PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS
RRFGDSSDSDNGFSSAGSTPAKPTVEKLSRTKFRHGQQLFPEGSPGDQWVKHRQPLQQKP
YNNHSEMSDLLKAKNQNMRGNGRKQYQDSPNQKKRTNGVHSQSAKQQNPLMKCEKKFHPR
KLQDNFETDAVYDSPCSGEDQLLEHAEGQSVTCNGHCKFPFSSRTFLSFKFDHNAIMKIL
DL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacgggtggaaattcccggcagcgtcttggacgatctctgcagccgattt
atcttgcatattccgagcgaggaaagagacaatgcaatccgagtgtgttttcagattgaa
cttgcccattggttttacttggatttctacatgcagaacacaccaggattacctcagtgt
gggataagagactttgctaaagctgttttcagtcattgtccatttttgctgccacaaggc
gaagatgtggaaaaagttttggatgaatggaaagaatataaaatgggagtaccaacatat
ggtgcaattattcttgatgagacacttgaaaatgtactactggttcagggatacctagca
aaatcaggctggggatttccgaaaggaaaagtgaataaagaggaagctcctcatgattgt
gctgctagagaggtctttgaagaaactggttttgatatcaaagactatatttgtaaggat
gattacattgaacttcgaatcaatgaccagcttgctcgtttgtacatcattccaggagtt
ccaaaggacacaaaatttaacccgaaaactagaagagaaattcggaacattgagtggttc
tcaattgagaaattgccgtgtcatagaaatgatatgaccccaaaatccaaacttggtttg
gcacctaacaaattttttatggccattccatttatcagaccattaagagactggctttct
cgaagatttggagattcctcagacagtgacaatggattttcctcagctggcagcacacca
gctaaacccactgtggaaaaattaagtcgaaccaaattccgccacggccagcagttattt
cctgaaggttctcctggtgaccagtgggtaaagcacaggcaaccactgcaacaaaagcca
tataataatcattctgagatgtccgacctcttaaaagcaaagaatcaaaatatgagggga
aatggcagaaaacagtatcaagactcccctaatcagaagaaaagaacaaatggtgttcac
agtcagtcagcaaaacaacagaatcccttgatgaaatgtgaaaaaaaatttcatccacga
aaacttcaggataattttgaaacagatgctgtatatgactcaccttgctctggtgaagat
cagttgttagaacatgctgagggacagtctgtgacatgtaacggacattgcaagttccca
ttttcatccagaacttttttgagtttcaagtttgatcataacgccataatgaaaatcttg
gatctttga
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