Trichechus manatus latirostris (Florida manatee): 101361917
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Entry
101361917 CDS
T05135
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101361917
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101361917
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101361917
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101361917
mRNA cycle factors
Stress granule specific factors
101361917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
101361917
NCBI-ProteinID:
XP_023598808
UniProt:
A0A2Y9S307
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTASSLPSENAGRPIQNSALPSAS
ITSTSAAAVPSNMAHPKEKTPMCLVNELARFNKIQPEYKLLREQGPAHCKVFTVQLTLGD
QHWEAEGTSIKKAQHTAAAKALEGTKFPKPIVRPFRSEGRNPESITPTVELNALCMKLGK
KPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGRTRQ
AAKHDAAAKALRILQNEPLPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVNFESFP
LKQVARESGPPHMKSFVTKVSVGQFIGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVER
VKPRIKKKTKSIVKLHTGPEYGQGMNPISRLAQIQQAKKEKEPEYMLLTERGLPRRREFV
MQVKVGNHTAEGVGTNKKVAKRNAAENMLEILGFKVPQSQPAKPALKSEEKTPIKKPGDG
RKVTFFEPGCTDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDLT
RAAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTRPSEQLDYLSRVQ
GFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQS
TEMPRTGNGPLSVCGRC
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaagtgcaagttcagaacccatctgctgctctctcagggagccaaata
ctgaacaagaaccagtctcttctctcacagcctttgatgagtattccttctactgctagc
tctctgccctctgaaaatgcaggtagacctattcaaaactctgctttaccctctgcatct
atcacatccaccagtgcagctgcagttccttctaacatggcacaccccaaagagaaaacc
ccaatgtgtcttgtgaatgagttagcccgtttcaacaagattcagcctgagtataagctt
ttgcgtgagcaaggtccagctcactgtaaggtgtttacagtacagctaacacttggagat
cagcactgggaagctgaaggaactagtattaaaaaagcccaacacacggctgctgccaaa
gctttggaaggaacaaaatttcctaaacctatagtccgcccttttcgtagcgaaggaagg
aatccagaaagcataactcctactgtagaactaaatgcactgtgcatgaaacttgggaaa
aaaccaatgtacaagcctgttgacccttactctcggatgcagtccacctacaactacaac
atgagaggaggtgcttatcccccgagatacttttacccatttccagttccacctttactt
tatcaagttgaactttctgtgggaggacagcaatttaatggaaaaggaaggacgagacag
gctgcgaaacatgatgctgcagctaaagcactgaggattctgcagaacgagccccttcct
gagaggctggaggtaaatggaagagaatcagaagaagaaaatctcaataaatctgaaata
agtcaagtgtttgagattgcacttaaacggaacttgcctgtgaattttgagtctttccct
ctaaaacaggtcgcccgagagagtggcccaccccacatgaagagttttgtgaccaaggtg
tcagtcgggcagttcataggggaaggtgaagggaagagcaagaagatttcaaagaagaat
gctgctatagctgttcttgaggagctgaagaagttacctcccctccctacagttgagcga
gtgaagcccagaatcaaaaagaaaacaaaatccatagtcaaactacatacaggcccagaa
tatggccagggaatgaatccaattagcagactggcccagatccagcaggcgaaaaaggag
aaggagccggagtacatgctcctcaccgagcgaggcctcccgcgccgcagggagtttgtg
atgcaggtgaaggtcggaaaccacactgcggaaggagtaggcaccaacaagaaggtggcc
aaacgcaacgcagccgagaacatgctagaaatccttggtttcaaagtcccacagtctcag
cctgccaaaccggcactcaagtcagaggagaagacacccataaagaaaccaggagatgga
agaaaagtaaccttttttgaacctggctgcacggatgaaaacggaactagtaataaggaa
gatgagtttaggatgccttatcttagtcaccagcagctgcctgctggaattcttcccatg
gtgcccgaggttgcccaggctgtcggtgtcagtcaaggacatcacaccaaagatctcacc
agggcagctccgaatcctgccaaggccacggtgactgccatgatagcccgtgagttgttg
tacgggggcacctcgcccacagccgaaaccattttaaagaataacatctcttcaggccac
gtaccccatggacctctcacaagaccctctgagcaattggactatctttccagagtccag
ggattccaggttgaatacaaagactttcccaaaaacaacaagaacgaatttgtatctcta
atcaattgctcctctcagccgcctctgatcagccacggcatcgggaaggatgtggagtcc
tgccatgatatggcggcactgaacatactaaagttgctgtctgagttggaccaacaaagt
acagagatgccaaggacaggaaacggaccattgtctgtgtgtgggaggtgctaa
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