Trichechus manatus latirostris (Florida manatee): 101361942
Help
Entry
101361942 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04622
RIG-I-like receptor signaling pathway
tmu05161
Hepatitis B
tmu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101361942
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101361942
09172 Infectious disease: viral
05161 Hepatitis B
101361942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101361942
03041 Spliceosome [BR:
tmu03041
]
101361942
03036 Chromosome and associated proteins [BR:
tmu03036
]
101361942
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101361942
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101361942
mRNA cycle factors
Common to processing body (P body) and stress granule
101361942
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101361942
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101361942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101361942
NCBI-ProteinID:
XP_004376981
UniProt:
A0A2Y9DLT5
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRNDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFSKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYSRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSENITQKVV
WVEEPDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNVNITKDLLDLLVEAKQEVPSWLESMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSGFSSSRAGSSRSGGGGHGGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagacaatcagagtggaggaagtacagccagcaaagggcgttatattcct
cctcacttaaggaacagagaagctactaaaggattctacgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttgggtctcgcaatgattcaagaggg
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgcgga
cggagtgactatgatggcattggcagtcgtggtgacagaagtggctttagcaaatttgaa
cgtggtggaaacagtcgctggtgtgacaagtcagacgaagatgattggtcaaaaccactt
ccaccaagtgaacgcttggagcaggaactcttttctggaggcaatactgggattaacttt
gagaaatatgatgacattccagttgaagcaacaggcaataactgtcctccacatattgaa
agtttcagtgatgttgaaatgggagaaattattatgggaaacattgagcttactcgttat
agtcgcccgactccagtgcagaagcatgctattcctatcatcaaggaaaaaagagacttg
atggcttgcgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagt
caaatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
ggacgccgcaaacaataccccatctccttggtgttagcaccaacgagagaactggcagtt
cagatctatgaggaagccaggaaattttcataccgatctagagttcgtccttgcgtggtt
tatggaggtgctgatattggtcagcagattcgagacttagaacgtggatgccacttgtta
gtagccactccaggacgtctagtggatatgatggaaagaggaaagattggattggacttc
tgcaaatacttggtgttggatgaagctgataggatgttggatatggggtttgaacctcag
atacgtcgaatagttgaacaagatactatgccaccaaagggagttcgccacaccatgatg
tttagtgctactttcccgaaggaaatacagatgcttgctcgtgatttcttggaagaatac
atctttttggctgtaggaagagttggctctacctctgagaacatcacacagaaagtagtt
tgggtcgaagagccagacaaacggtcatttctgcttgaccttctaaatgcaacaggcaag
gattcattgaccttggtgtttgtggagactaagaagggggcagattctctagaggatttc
ctataccatgaagggtatgcttgtaccagtatccatggagaccgatctcagagagataga
gaagaggcacttcaccagttccgctcaggaaaaagcccgattctagtggcaacagcagtg
gctgcaagaggactggacatttcaaatgtgaaacatgttatcaattttgacttgccaagc
gatattgaagaatatgtacatcgcattggccgtacaggacgagtcggaaaccttggcctc
gccacttcattctttaacgagaggaacgtaaatattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaagcatggcttatgaacaccactac
aaggggagcagtcgtggacgttctaagagtagtagattcagtggaggatttggtgccaga
gactaccgacaaagtagcggtgccagcagttctggctttagtagcagtcgtgcgggcagc
agccgtagtggtggaggcggtcacggaggcagcagaggatttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccaaggggttgactggtgg
ggtaactga
DBGET
integrated database retrieval system
