Taurinivorans muris: JBF11_00805
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Entry
JBF11_00805 CDS
T09798
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tmur
Taurinivorans muris
Pathway
tmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JBF11_00805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmur03019
]
JBF11_00805
03009 Ribosome biogenesis [BR:
tmur03009
]
JBF11_00805
Enzymes [BR:
tmur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
JBF11_00805
Messenger RNA biogenesis [BR:
tmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JBF11_00805
Ribosome biogenesis [BR:
tmur03009
]
Prokaryotic type
rRNA processing factors
JBF11_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UWX06695
UniProt:
A0ABY5Y3A9
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All DBs
Position
174338..176257
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AA seq
639 aa
AA seq
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MVPVEEKSENKKAAASRKRGRKGKNASENKEIIAGEVNENAKPEEKDVDFVAGVNGVAEY
NGTESLSACGEQAGLGVLGVIEEAPYIDAVLPLVSDSEKSIKKPRKRGRKKKIQNEADLV
QEFENFPIVEDGEIARIEAEETLRKAKKNKKETAKDKKEHVHRVLYVSTVPDEQVEVVIT
ENGVVSEYFVEMAHQSKIRGNIYKGVINNVDTNLQAAFVNFGCGKNGFLQIDEVHPEYYL
SLHHETSAKYPPIQKVLKVGQEVLVQVVKEPNGSKGAFLTTWLSLAGRFLVLTPGQEQIG
VSRKVEDNEERQRLRMLLNGIKPGENMGVIIRTASEGASKTHIHKDLQLLKRTWKTIQKQ
VVKSPAPSLVYQEADLATRAVRDYLNEDIDEVWVDSKDVQKSVGELIKVLFPKNKDMLHL
YDDKRQTLWEHFNITRQLDEVTKREVNLPSGGRLVFDQTEALMAIDINSGKSQGKSNFEA
MVYRTNMEAVEAIARHLRLRDIGGQVVIDFIEMRDKNHCRDVENALHAAMKRDRARHDIG
KLSGFGLLELVRQRTGSSVISITSEPCPHCRGTGFRRNLEWQAQGVLRDIRSKLAGKNVP
ATYVHHVEQEIAFYLLNKKRDRLSELEHEFNVRIEIHLK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggttcctgttgaagaaaaaagtgagaataagaaagccgcagcttccaggaaacgcggc
cgtaaaggcaagaatgcgtcagaaaataaagaaatcatcgcaggcgaagttaatgaaaac
gcaaaaccggaagaaaaagacgttgattttgtcgcaggcgtgaacggtgttgccgaatac
aacggaacggaaagcttaagcgcttgcggtgagcaggcaggtttgggagtcttgggtgtt
attgaagaagccccttatatcgacgccgttctgcctcttgtcagcgattctgaaaaaagc
ataaaaaagccaagaaaacgcggccgtaaaaagaaaattcaaaatgaggcggatttagtt
caggaatttgaaaatttccctattgtggaagacggcgaaatcgcccgcatcgaagctgaa
gaaacgctgcgcaaagcgaaaaaaaataagaaagaaacggcaaaagataagaaagagcat
gttcacagggtgctttatgtaagcaccgtgcccgacgaacaagtcgaagttgtgattacg
gaaaacggggttgtttccgaatatttcgttgaaatggcgcatcagagcaaaatccgcgga
aatatttataagggcgtcatcaataacgtggatacgaacctgcaagcggcttttgtcaat
ttcggctgcggtaaaaacggctttttgcaaattgacgaggtgcaccccgaatattatttg
tctttgcatcatgaaacctcggctaaatatcctcccattcaaaaagttttgaaagtcggt
caagaagttttggtgcaggtggtcaaagaaccgaacggttccaaaggggcttttttaacc
acatggctttcccttgcggggcgttttctcgttttaactcccgggcaggaacaaatcggc
gtttcccgcaaggttgaagacaatgaagagcgtcaaagactgcgtatgctgctcaacggt
attaagcccggtgaaaatatgggcgtgattatccgcaccgcgagcgagggagcgagcaag
acgcatattcataaagatttgcagctgctgaaacgcacatggaagaccattcaaaaacaa
gtcgtgaaatcacctgctccgagtttggtttatcaggaagcggatttagccacccgtgcg
gtccgtgattatctgaatgaagatattgatgaggtttgggttgattccaaagatgtgcaa
aaaagcgtcggcgaactgataaaggtccttttcccgaaaaataaggatatgctgcattta
tacgatgataagaggcaaacgctttgggagcatttcaatatcacccgtcagcttgacgaa
gtgactaaacgggaagtcaatcttccttccggcggccgtttggtttttgaccaaacggaa
gcgcttatggcgatagatatcaactccggaaaaagccaaggcaaaagtaattttgaagcc
atggtttacaggacgaatatggaggctgtggaagccatagccagacatttgcgccttcgt
gacattggcgggcaggttgttatcgattttattgaaatgcgggataaaaaccattgccgc
gacgtggaaaacgcgttgcacgccgcaatgaaacgcgaccgggcaaggcacgatatcgga
aaattgagcggtttcggcttgcttgaactcgtccggcaaagaaccgggtccagtgttatt
tccataacctccgaaccatgtccgcattgtcggggaacggggtttagaagaaacttggag
tggcaggcgcagggggttttgcgtgatatcaggagcaagctggcaggaaaaaatgtgcct
gcaacgtatgtgcatcatgtggaacaggaaatcgcgttttatttattgaataaaaaacgt
gacaggctgagcgaacttgaacatgaattcaatgtgcgtattgaaattcatttaaaataa
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