Taurinivorans muris: JBF11_02540
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Entry
JBF11_02540 CDS
T09798
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tmur
Taurinivorans muris
Pathway
tmur03030
DNA replication
tmur03430
Mismatch repair
tmur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JBF11_02540 (dnaE)
03430 Mismatch repair
JBF11_02540 (dnaE)
03440 Homologous recombination
JBF11_02540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmur03032
]
JBF11_02540 (dnaE)
03400 DNA repair and recombination proteins [BR:
tmur03400
]
JBF11_02540 (dnaE)
Enzymes [BR:
tmur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JBF11_02540 (dnaE)
DNA replication proteins [BR:
tmur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JBF11_02540 (dnaE)
DNA repair and recombination proteins [BR:
tmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JBF11_02540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Peptidase_C23
Toxin_R_bind_N
Motif
Other DBs
NCBI-ProteinID:
UWX06215
UniProt:
A0ABY5Y1Y8
LinkDB
All DBs
Position
558505..562026
Genome browser
AA seq
1173 aa
AA seq
DB search
MSFVHLHCHTEYSLLDGAIRIGDLTKKASSLGMPAAAITDHGNMHGAAYFYMSCKDHGIT
PILGCEVYVTKDHKDSTSELAKIRHHLILLAKNKQGYQNLIALVSRSFLDGYYYKPRVDK
GLLAQYNEGIIALSACIAGEIPRTLRGNNAFIQGGGTFEDAITIAKEYASLYPDSFYLEV
QSNTLPEQSLVNNRIYELAHETKLPIVATNDCHYLNSNDVEAHDILLCVQQQRTEFDENR
WKFDAKDLYYKTPEEMIASFKDHPDAIENTLKIADECKGLEIQLKTPPYHFPVYELPEGM
TLETEFRKLAREGLERRIEKHPKRDTLDINLYKERLEMELNVICGMGFPGYFLIVQDFIN
WAKNKGIPVGPGRGSAAGSLVAWSLRITNLDPIPYHLFFERFLNVERVSMPDIDVDFCED
RRLEVVEYVSQKYGKDKVAQIATFGKMKAKAVIRDVGRAIGLSFQDTSRICKILGDDLGI
TLEKSLANNKEFKEEYDKNPSSKRLIDICLRLEGLSRHASTHAAGVVVSDKPMHEYLPLF
KGKKDELVTQFDMKIVEKVGLVKFDFLGLRTITLINKAIKNILHQGKTPPDLDTLPFDDP
QIYDLYSKGDTDGVFQVESTGMRKYLRMLRPSCFEDLIAMLALYRPGPLNSGMVDEFCKR
KHGEVEVTYPLPELEACLKDTYGVIVYQEQVMQIAQIVAQYTLGGADLLRRAMGKKKPEE
MAQQRGIFLDGSGKRGVPEDKANEIFDLMEKFAEYGFNKAHSAAYAVISYHTAYLKRYFP
VEFMSALLSSEIGNQDKILKYVAVCNEMNIKVKAPDIQKSRREFTPDDDCIIYGLGGVKT
VGDEAINEIVRNREEKGPYKSFYDFCLRVNLRKVTKRVLENLIKSGALDCFGVSRNGLLA
SMESVLAKVAKKQKEKESRQVSLLMFAPMDEETGQGGIGFTCHENSLPEWVEEEKINFEK
EALGFYLTSHPLQAYKTDFERLGIIPLEDVKQMDNKALINTAVLVTGIKEIITKTGKKMA
FLQIEDLTGHGELIIFPKKYEELRSYFSEESNNLYYLTATVDKSQVEENSFDEDKDDDEE
AKVELKLLAENMIPLLEACENCHKEVCIDFGSKQIADTALFKQILQKHRGKAPFYAWVKV
DGEFACQLKFGENWNIKATPEFYRDIKTFCDTQ
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtacatttacattgtcacacggaatacagtttgcttgacggtgcgataagg
attggtgatttgacaaaaaaagcgagcagcttgggtatgcccgccgcagccatcaccgac
cacggaaatatgcacggcgcagcgtatttttacatgtcctgcaaagatcatggaatcacc
cccattttgggctgtgaagtctacgttacaaaagaccataaagacagcacgagcgaactt
gcgaaaattcggcaccacctcatcttattggcaaaaaacaagcagggatatcagaatttg
attgctttggtcagccgaagctttttagacggatattattataagccgcgtgtggataaa
ggacttttggctcaatacaatgaagggatcatcgccttatccgcctgtattgcgggtgaa
attccgcgcactttgcggggcaataacgcttttattcagggaggcggaacatttgaagac
gcaatcaccattgccaaggaatatgcaagtctttatcccgacagtttttatcttgaagtg
cagtcaaacaccttgccggagcaaagtttggtcaataacaggatttacgagctcgcccac
gaaacaaaacttcccattgtcgccacaaacgactgccattatctgaacagcaacgatgtg
gaagcccatgacattttgctttgcgtccagcagcagcgtacggaatttgatgaaaaccgc
tggaaattcgatgccaaagacctttattacaaaactccggaggaaatgatagcgtctttt
aaagaccatcctgacgctattgaaaatacccttaaaattgctgatgaatgtaagggattg
gaaatccaattaaaaactcctccttatcattttcctgtttatgaattgcccgaaggcatg
acccttgaaacggaatttagaaaacttgccagggaaggcttggaaagacggattgaaaaa
catcctaaacgggatactcttgatataaatttatataaggaacggcttgaaatggagctc
aatgtcatttgcggcatgggctttccgggctatttccttatcgtgcaggactttatcaac
tgggctaaaaacaaagggatccccgttggtcccgggcgcggttccgctgccggctccttg
gttgcgtggtcgcttcgtatcacgaaccttgaccctattccttaccatttgttttttgaa
cgttttctcaatgtggaacgtgtttccatgcctgatattgatgttgatttctgcgaagac
aggcgtcttgaagttgtggagtatgtttcccaaaaatacggcaaggacaaagtcgcccaa
atcgccacgttcggtaagatgaaagcaaaagccgtcatccgcgatgtgggacgcgccatt
ggtctttcttttcaggatacaagcaggatttgtaagattttaggcgatgatttggggatc
acccttgaaaaatcccttgccaacaataaagaatttaaagaagaatacgataaaaatcct
tcttccaaacggcttatcgatatttgtctgcgtctggaggggctttcccgtcatgcttcc
actcacgccgccggtgttgtcgtgtccgataagcccatgcatgaatatttgccgcttttt
aaaggcaagaaagacgaacttgtcacccaattcgacatgaaaatcgtggaaaaagtcggt
ttggtgaaatttgactttttgggactcagaaccatcacattaatcaataaagccattaaa
aatatccttcatcagggaaaaacgccgcccgatttggatacgcttccttttgacgaccca
cagatttatgatttgtattcaaaaggggatacggacggggttttccaagttgaaagcaca
ggcatgcgcaaatatctgagaatgctgcgtccgagctgttttgaagatttgatcgctatg
cttgcgctgtaccgtcccggaccgcttaactccggcatggtcgatgaattttgcaaaaga
aagcatggagaagtcgaagttacctatcctttgccggaattggaagcttgtttgaaagat
acttatggtgttatcgtataccaggaacaagtcatgcagatcgcccaaatcgtcgcccaa
tacacgcttggcggtgcggacctgctgcgccgcgccatgggtaagaaaaagcctgaagaa
atggctcagcagcggggcatttttcttgacggttccggaaagcgcggggttcctgaagat
aaggcgaatgaaattttcgaccttatggaaaaattcgccgaatacggtttcaataaggca
cacagcgccgcatatgctgttatttcgtatcataccgcgtacttaaagagatattttcct
gtggaattcatgagcgcattgctgagctctgaaatcggaaatcaggacaaaattttaaaa
tatgtcgctgtttgcaatgaaatgaacataaaagtcaaagctcctgacattcaaaaaagc
agacgggaattcactccggatgacgattgcatcatttatggattaggcggggtaaaaacc
gttggtgatgaagcaatcaatgaaattgtgcgcaacagggaagaaaaaggaccttataag
tctttttatgatttttgcctgcgggtcaatcttcgtaaggttaccaagcgggtattggaa
aatctcataaaatccggcgcattggattgtttcggtgtgtcacgcaacgggcttttggca
agtatggaaagcgttcttgccaaagtcgcaaaaaagcaaaaagaaaaagaatcaagacaa
gtgtcgcttctcatgttcgcaccgatggacgaagaaaccggtcaaggcggaattggcttt
acctgccatgaaaacagccttcccgaatgggtggaagaagaaaaaatcaattttgaaaaa
gaagccttgggattttatttaacttcccatcctttgcaggcgtataagacagattttgaa
cggctaggcatcattccccttgaagatgtcaaacaaatggataacaaggcgcttatcaat
accgcagttttggttacgggaataaaagaaatcataaccaaaacgggcaaaaaaatggcg
tttttgcaaatcgaagatttgacgggacatggggaactgatcatttttccaaaaaaatat
gaagaactgcgttcgtatttttcagaagaatcaaataatctttattatttaacggcaact
gtcgataagagccaagttgaagaaaacagttttgacgaagataaggacgatgatgaagaa
gccaaagtcgaattgaaacttcttgcggaaaatatgataccgcttttggaagcgtgtgaa
aattgccataaggaagtttgcattgatttcggctcaaaacaaatcgcagataccgcatta
ttcaaacaaatattgcaaaaacataggggaaaggctcctttctacgcttgggtaaaagtt
gacggcgaatttgcctgtcaattgaagttcggcgaaaattggaacattaaggcaacgcct
gaattttatcgggatataaaaacattttgcgacacgcaataa
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