Taurinivorans muris: JBF11_03995
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Entry
JBF11_03995 CDS
T09798
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tmur
Taurinivorans muris
Pathway
tmur03410
Base excision repair
tmur03430
Mismatch repair
tmur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JBF11_03995 (recJ)
03430 Mismatch repair
JBF11_03995 (recJ)
03440 Homologous recombination
JBF11_03995 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmur03400
]
JBF11_03995 (recJ)
DNA repair and recombination proteins [BR:
tmur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JBF11_03995 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JBF11_03995 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JBF11_03995 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UWX06481
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Position
complement(844934..846649)
Genome browser
AA seq
571 aa
AA seq
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MRKVIWKKQAAHSEYEIPASLIEQLGISSRLASILQERNIKHDEIAAFLSPHLRYLALPE
KWPGIAEGAKCIANALLAGKKIVVWGDYDVDGITGVCVVLEVLRYYGFDPLWHLPERISE
GYGLNESYLEKLAEQGATVLLTVDCGISDFKAVERANELGFTVIVSDHHLPQDSLPRAHV
LCNPKLADCPCSELAGVGVAFFLMAEVNRLLSKACGKPKMDMREVLDLVAFGTLSDMVPL
IEQNRILVKNGMLLLNEARRLGFAALKHVSRMNSKDPLTTRQIVFALAPRINAAGRMAEA
SMAVKLLMSKDVEEVKEIVAVLDKYNEDRKQEEKEMIKEALEQARAQECSPAIFVAKEEW
NQGIVGIIASRLVEKYYKPAFVFCKDGDMWKASARSIDAINLHEAIAHCAEFLNSFGGHQ
MAAGVRVEDKNFQAFQECFCAYLNKEYGTDGFEEIVYYDGELSFCEAVDYHFKREIASLQ
PFGISNREPVFLSPELIIKQAYFYGYLKNHVRLTLYDESTKTTIQVKMWGQAHNFEENAV
GRRMQVLFVLNLDVHSNLEEPIKIKHWNFID
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagtgatatggaaaaagcaagccgcacattctgagtatgaaattcccgcttct
cttattgaacaactgggaatttcttctcgccttgcgtccatattgcaggaacggaatatt
aaacacgatgaaatcgccgcttttttaagcccgcatttgcggtatcttgccttgcctgaa
aaatggcccggtattgctgaaggggcaaaatgcattgcaaatgcgcttcttgcgggaaaa
aaaattgtcgtttggggtgattacgatgtcgacggcattaccggcgtttgcgttgttttg
gaagttttgcgctattacggtttcgaccctttatggcatttgcccgaacgcatttccgaa
ggctacggattgaatgaatcgtatctggaaaagcttgcggaacaaggcgcaacggtttta
ctgaccgttgactgcggcatttctgattttaaagccgtggaacgggctaacgaactcggg
tttacggttatcgtgtccgaccaccatttgccgcaggactctttgccccgcgcccatgtg
ctttgcaatcccaaattggcggattgtccttgttccgaacttgccggggtaggggtcgca
ttttttcttatggcggaagtcaacaggcttttatccaaggcttgcggcaagcctaagatg
gatatgcgggaagtgcttgatttagtggcttttggaacgctttccgatatggttccatta
attgaacaaaaccgcatactagtgaaaaacggcatgcttttgctgaatgaagcccggcgc
ttgggctttgcggctttgaaacatgtttcaagaatgaacagcaaggaccctctcaccaca
cggcaaatcgttttcgctcttgctcccagaatcaatgcggcgggcagaatggcggaagct
tcgatggcggtgaagcttctgatgtcaaaggatgttgaagaagtgaaagaaattgttgcg
gtacttgacaaatataatgaagaccgcaagcaagaagaaaaagaaatgataaaagaggcg
ttggagcaggcaagggctcaagagtgttctcctgcgatttttgtggcaaaagaagaatgg
aatcagggtattgtcggaataatcgcttcccgtttagtggaaaagtattacaagcccgct
tttgttttttgcaaagacggcgatatgtggaaagcgtcagcaagaagtatcgatgctatt
aatttgcatgaagccatagcccattgtgctgaatttttaaatagtttcggcggccatcaa
atggcggcgggcgttcgtgttgaagataagaattttcaagcgtttcaagaatgtttctgt
gcttatctgaataaggaatacggcacggacggttttgaggaaattgtttattatgacggg
gaactttccttctgtgaagctgttgattatcattttaagcgggaaatagcttctttgcag
ccctttggcatatccaatagggaacccgttttcctttctccggagcttatcatcaagcag
gcatatttttacggatatttaaaaaatcatgtccggctgaccttatatgatgaaagcacc
aaaacaacaatccaggtgaaaatgtggggacaagcccataattttgaggaaaatgccgta
ggacggcgcatgcaggttttatttgtgcttaatcttgacgtgcattccaacttggaagaa
cctataaaaatcaagcattggaattttatcgattag
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