Taurinivorans muris: JBF11_04035
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Entry
JBF11_04035 CDS
T09798
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tmur
Taurinivorans muris
Pathway
tmur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JBF11_04035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmur03400
]
JBF11_04035
Enzymes [BR:
tmur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JBF11_04035
DNA repair and recombination proteins [BR:
tmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JBF11_04035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
PIF1
HHH_5
Helicase_RecD
UvrD-helicase
AAA_22
NPHP3_N
RsgA_GTPase
MeaB
AAA_28
AAA_29
ABC_tran
T2SSE
NTPase_1
SLFN-g3_helicase
PhoH
DEAD
UvrD_C
AAA
AAA_16
TraI_hel_assoc_N
AAA_14
AAA_24
TrwB_AAD_bind
nSTAND3
ATPase_2
Zeta_toxin
TsaE
MobB
SRP54
cobW
ResIII
Thymidylate_kin
NB-ARC
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UWX06488
LinkDB
All DBs
Position
complement(852694..855018)
Genome browser
AA seq
774 aa
AA seq
DB search
MGRQVQGTFSSGNAVEIRGSIERIVFHNEENGYTIFRLRPEKKLDLETLVGTMQNPQTGT
QIKAKGQYIVHPKFGRQLQMESYVEERPSSAEGIRAFLASGCIRGIGPKWAEKIVSRFGG
DTFNILDNEPDKLLEIPRFGQKRLTAVKISWAEHQGVRELMVFLQEHGIGASFAFRIYKH
YEKHALDIVKENPYRLAMDVFGIGFHTADMLAMKLGFDSNSLLRAEAGLLYTLMELSGEG
HIYYPEDKLVERTSGELNIDSNLVAKALLNLEKEERIVLDELDDHKGVYLYRHHVYETKI
AFYLKRLLNSPRTVCFKNAEKSIDAVLAKMNIELAEEQLNAVNTAVRSKIMVLTGGPGTG
KTTILNAIIKVFQSAGAKVLLAAPTGRAAKRMTETSGVEAKTIHRLLEFSPKEEGFGRNE
NNPLACSLLVVDEASMMDTMLMYHLIKAAPMGTTLILVGDVNQLPSVGPGNVLRDIIASG
TVPVVELVEVFRQAAESDIICNAHLINKGELPYLRSGLRTDFFMFKQEGGEECANLIVDL
VKNRIPRKFGFSPEEIQVLCPMTKGSTGTQNLNKELQKALNPSMLQIVRGDKVFKLNDKV
MQIRNNYDKDVFNGDIGSIIIINAEDRELVIRFDERNVVYAFEELDEVVPAYAITIHKSQ
GAEYPVVIIPLLMQHFVMLERNLIYTAVTRGKKMVVLVGQMKALAMGVKNNKIRKRYTWL
AKRLACDERLLRADMLPFAMDKREERNQDVSDNYDDIEFLQPIDEEIIFYDDYE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcaggttcaaggcactttttcttccggcaacgccgttgaaatacggggcagt
atcgagcgtatagtttttcataatgaagaaaatggctatacgatttttcgcttgcgtccg
gaaaagaagcttgatcttgaaacattggtcggaaccatgcaaaatccgcaaacgggaacg
cagatcaaggcaaaaggccagtatatcgttcatccgaaattcggacggcagctgcaaatg
gaaagttatgtcgaagaacgcccgtcttctgccgaggggatacgcgcttttttggcttca
ggctgtatccgcggaatcggtcccaaatgggcggaaaaaatcgtttcccggtttggcggc
gatacgttcaatattttagataacgagcctgataaattgcttgaaattccccgttttggg
cagaaacgtctgactgctgtgaaaatttcatgggcggaacatcagggggttcgggaattg
atggtttttttgcaggagcacggtatcggagcgtcttttgcgtttaggatttataagcac
tatgaaaagcatgctctcgatattgtgaaagaaaacccttaccgtttggcaatggacgtt
tttggcatcggtttccacacggctgacatgctcgccatgaaactcggttttgacagtaac
agtttattgcgggcggaagcggggcttttgtatactttgatggaactttccggagagggg
catatttattatcccgaagacaagcttgtcgaaagaacttccggcgaattgaacatcgac
agcaatcttgtggcgaaagcgcttctgaatttggaaaaggaagagcgtatcgttcttgac
gagctggacgaccataagggcgtttatctatacagacatcatgtgtatgaaacaaaaatc
gctttttatttgaaacgcttattaaattctccccgtaccgtttgttttaaaaacgccgaa
aaaagcatagatgccgtgcttgccaaaatgaatatcgaattggcggaagaacagctcaat
gccgtgaatactgccgtgcggtcgaaaataatggtgcttacgggcggtccgggaaccgga
aagacaacgattttaaatgccattatcaaagttttccagtccgcgggagcaaaggtattg
cttgcggcgccgacagggcgagccgcaaagcgcatgacggaaacaagcggggttgaagcg
aaaaccatacaccgtttacttgaattcagcccgaaagaagaagggtttggaaggaacgaa
aacaatcctttggcttgttctttgcttgttgtcgatgaagcgtccatgatggacaccatg
ctcatgtatcatttaattaaagccgcccctatgggaacgacgcttattttggtcggagat
gtcaaccaactgccttctgtcggtcccggaaatgtgctgcgtgacattatcgcttccgga
accgtgccggttgtcgaattggtcgaagtgttcagacaagcggctgaaagcgatattatt
tgcaatgctcacttgatcaacaagggggaactgccttatctgcgttccggtctgaggact
gatttctttatgttcaaacaagagggcggcgaagaatgcgcaaatctcatcgttgatttg
gtgaaaaacagaataccccgtaaattcggtttttcgccggaagaaatacaagtgctttgt
cccatgacaaaaggcagcacgggaacgcagaacctgaacaaagagctgcaaaaagccctc
aatcccagcatgttgcaaattgttcggggcgacaaggtttttaaattgaatgataaggtc
atgcaaatcaggaataattatgataaggatgttttcaacggcgatatcggttccatcatt
atcataaatgccgaagacagggagcttgttatccgttttgatgaacgcaatgtcgtctat
gcttttgaagaactggacgaagtcgtgcctgcctatgccattacaatccataaatcacag
ggagccgaatatccggttgtcatcatccctcttttaatgcagcatttcgtaatgctcgaa
agaaatctcatttatacggctgtgacaagaggaaagaaaatggtcgtgcttgtggggcaa
atgaaagcacttgccatgggagtgaaaaataataaaatcagaaagcgctatacttggctt
gctaagcgactggcttgtgacgaacgtttattgcgtgcggatatgcttccttttgcaatg
gataaaagagaagaacgaaatcaggatgtttccgataattatgatgatattgagttttta
cagccgatagatgaggaaataattttttatgacgattatgaataa
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