Taurinivorans muris: JBF11_05810
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Entry
JBF11_05810 CDS
T09798
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tmur
Taurinivorans muris
Pathway
tmur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JBF11_05810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmur03019
]
JBF11_05810
Messenger RNA biogenesis [BR:
tmur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JBF11_05810
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UWX05000
UniProt:
A0ABY5XYN4
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All DBs
Position
1218977..1220641
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AA seq
554 aa
AA seq
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MNKKFLRIHPLGGLGEIGLNCQKWECPEGTFLMDCGLMFPDDSHYGIDAVIPSFESLINN
KEKFLGVVLTHGHEDHIGALPWLLRIVKNIDIYGSAFTLALVKHKLTERGLLERANLILV
ETYDVITIGSLKFQAIPVCHSIPGGYAYFIESPIGKIAYTGDFKLDEFSEEYPLENTCAL
QSDLKDFAKDGIKLLLSDSTNIENRRHSASESMVREGLDKIFTQTKGRIIIALFASHIQR
IGTVFELAKKHGKHVIISGRSLATNINIANELGYLTSENYYVENDETITELSRENTIVLA
TGTQGEALSALTRISSGEHKRLALHEGDTVIMSSRTIPGNAKAVSRMINQMYKQGATVYN
DDRFTIHATGHACHAELKTILELAKPEHFIPLHGEYRHLSQHAALAKQVGIEHCHLLEDG
QPICFYGDNTFEIEKSEPVDFVLVDGKGVGDVGRLVLKERRVLSNEGILIVSIVLAEETN
AVLSGPFVLSHGFVFEQQFNHYLQDAQCLVLEQLEMPDSKNRDKLPEMIRIALRRFFRDI
LGREPIIETIIHTV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttctgcgcatacacccgctcggagggcttggggaaataggtctgaac
tgtcaaaaatgggaatgtccggaaggaacgttccttatggactgcggacttatgtttccc
gacgacagccactacgggatcgatgccgtcattccctcattcgaatcgttaatcaacaat
aaggaaaaattcttgggagttgttttaacccatgggcacgaagaccatataggggcgttg
ccatggcttttgcgtatcgttaaaaatatcgatatttacggctccgcctttacgcttgct
ttggtcaaacacaaactcacagaacggggactgcttgaaagggcgaaccttatccttgtg
gaaacctatgatgtcataaccatcggttcgcttaagtttcaggcgattcctgtctgtcat
tccattccgggcggttatgcctattttattgaaagccccattggaaaaatagcatacacg
ggcgatttcaaacttgatgaattttctgaagaatatccccttgaaaacacctgcgcactg
caatccgatttaaaagatttcgcaaaagacggaataaagcttttgctttcagactccaca
aacatagaaaaccgcagacattccgcttccgaaagcatggtcagggaagggcttgacaaa
atttttacgcaaaccaaaggccgtatcatcattgcgcttttcgcaagccatatccaacgt
atcggcacggttttcgaattggcgaagaaacatggaaaacacgtcatcatcagcggacgg
agccttgcaacaaatatcaatatcgccaatgagctcggttacctgacatcggaaaattat
tatgttgaaaacgatgaaaccataacggaactttcgcgtgaaaacactattgttcttgca
accggcacgcaaggggaagccctttccgccctgacccgcatttcttccggagagcacaag
cgcctcgccctgcatgaaggggacactgtcatcatgtcttcccggactatcccgggtaac
gcaaaagccgtatcccgcatgatcaaccaaatgtacaaacaaggggcgacggtgtacaat
gacgaccggttcaccattcatgccaccggacacgcctgccatgccgaactcaaaacaatt
ttggaactggcgaaacctgaacatttcatcccgctgcacggcgaataccggcatttatca
caacatgccgctttagcgaaacaagtcggcattgaacactgccaccttttggaagacgga
cagcctatctgcttttacggtgacaatacttttgaaatcgagaaaagcgaacccgtggac
tttgtgcttgttgacggaaaaggcgtcggcgatgtggggcgtttggttttgaaagaacga
agagtcctatccaacgaaggcattctgatcgtatcgattgtcctcgccgaagaaacgaac
gccgttctttcgggtccgtttgtcctgtcccacggtttcgtgttcgagcagcagttcaat
cattacctgcaggacgcccagtgtcttgtgctggaacaactggaaatgcccgacagcaaa
aaccgcgacaaattgccggaaatgatccgcatagcgttaagaagatttttccgcgatatt
ctcggcagagaacccattatcgaaaccatcattcatactgtttag
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