Taurinivorans muris: JBF11_08350
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Entry
JBF11_08350 CDS
T09798
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
tmur
Taurinivorans muris
Pathway
tmur02020
Two-component system
tmur02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JBF11_08350 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JBF11_08350 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmur03021
]
JBF11_08350 (rpoN)
Transcription machinery [BR:
tmur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JBF11_08350 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
UWX05449
LinkDB
All DBs
Position
1791392..1792834
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AA seq
480 aa
AA seq
DB search
MALELKQQLKQTQQLLMSPQLQQAIKLLQMSRLELVEHIQQELLENPFLEEVQGSPELSD
VDENFSELNENRASSEADEGYSFEEINKNGDWEDYLGELSSAPKTSSAHEYESIEDNNFI
ETRYAEKSSLDDHLMWQLRLSSFTEEELDICENIIGNLDSCGYLRAELSEIAEATRSSAE
KVEELLYKVQRLDPVGVAARTPQECLLVQVEVLKYDRDPVLVELIKYHLTDLETHRYKPL
LRKFHLDMETLKEYLDIIQSLDPMPGASFGESEPLYVSPDVYVFPSDGDFVILLNDEDIP
NLRLNDFLDKGNVSAEVKDFTNKKIASASWLIKSLEQRKRTLYKVVESIVKFQRSFFEEG
VDKLKPLILKDIAEDIEMHESSVSRITTNKYVSTPHGVFELKFFFNSALSSDNGDSVGSE
SVKALIKKMIGKEDPKNPLADEKLCELLKQEIGVDIARRTVAKYRTALNIPSSSKRKQRF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctttggagcttaaacaacagctgaagcagacgcagcagcttcttatgtcgccgcaa
ttgcagcaagccataaaattgctgcaaatgtccaggctggagcttgtggagcatattcag
caggaattgcttgaaaacccttttttggaagaggttcaaggttcgccggaactttccgat
gttgacgagaatttttcggaattgaatgaaaaccgcgcaagttccgaagccgatgaggga
tattcctttgaagagataaacaaaaacggcgattgggaagattatttgggggaactttcc
tccgctcccaagacttcgtccgcccatgaatacgaatccatagaagacaataattttatc
gaaacacgctatgcggaaaaaagttctttggacgatcacctcatgtggcagctccgcctt
tcctcttttaccgaagaagagctggatatttgcgaaaatattatcggaaatctggacagc
tgcgggtatttgcgtgccgaactttccgaaatagcggaagcgacgcgaagcagtgcggaa
aaggtcgaagaactgctttataaggtgcagcgtcttgatcccgtcggggttgccgcaaga
acgccccaggaatgtctgcttgtgcaggtggaagtgctgaaatacgaccgggaccctgtt
ttggtcgagcttatcaaataccaccttactgaccttgaaacgcacagatacaagcccctt
ttgcgcaaattccatttggatatggaaaccctcaaggaataccttgatattatccagtcc
ctcgaccccatgcccggagcgagtttcggcgaaagcgaaccgttgtatgtcagccctgac
gtgtatgtttttccgagtgacggcgattttgtcattttattgaacgatgaagatattccc
aatttgcgcctgaatgattttttggataagggcaatgtttctgccgaggtgaaagatttc
accaataagaaaatagcgtccgcttcatggcttatcaaaagtcttgaacaaagaaagcgc
accctttataaggttgtggaaagcatagtcaaattccagcgttcgtttttcgaagagggc
gtggataagctgaagcctcttattttaaaagatatagcggaagatattgaaatgcatgaa
tcttctgtaagccgtattacgaccaataaatatgtttccacgccgcatggggtgtttgag
ctgaaatttttcttcaacagcgccctgagttccgacaacggcgactctgtcggctcggaa
agcgtgaaagcgcttattaagaagatgattggtaaggaagaccccaaaaacccccttgcc
gacgagaagctttgcgagcttttaaaacaggaaataggggttgacatcgcccgccgaacc
gtggcgaaatacaggacggcattgaatattccttcttcttccaaaagaaaacaacggttt
taa
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