Taurinivorans muris: JBF11_08675
Help
Entry
JBF11_08675 CDS
T09798
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tmur
Taurinivorans muris
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmur03016
]
JBF11_08675
Enzymes [BR:
tmur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
JBF11_08675
Transfer RNA biogenesis [BR:
tmur03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JBF11_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UWX05507
LinkDB
All DBs
Position
complement(1868627..1870900)
Genome browser
AA seq
757 aa
AA seq
DB search
MPIKVGLLVEFMQDNTPTLGCVLDEQGGKIRLLLANRREINLTQSRLLPWIGPIIQATAK
EDIVSGLIAHKELRQKTKENIDIAELWKMTQGEVTEESADFFAGLMENNINPDIVAGYAH
ALLECKNYFKFQNPLFEVYSQETAEAKLLAEKQQKEKTALVSGGADWFKHLWDLYCKHQH
VTDKDKAKEPPEPVAATLKGLLLKHMAETESHEENLLWKQVTKQIPDETYLAYYLAVTWK
LVPEHYNFWLSKIDYDETDNFALPFADELAAIQELAKKLSEKENFNPLPLPREQSRYKNA
LHCSLDKKQELCGIFSSIAQKEFISIDSASTKDIDDAFSFEEHADQTKEIHISLACPAFF
WQFQSDFDKIIAKRCTSIYLPEKNLHMLPEELSTNSFSLVENQIKPSMLIKAVFNAENEL
IDCGISFSRVHVCDNLQYSACEAVLSETISQIEEAKETVRQSSCHYPVNEERYAPDENAL
AKARKYGALLEKAYLFAEAHMQKRIENGAVIIERDEYDLYLEGTGSKTQVHLEPMPQSPK
AQLIVSELMVIANSIAADFAVSHEIPLFFRTQHIGIPKEMAGIWKKPEEIAKIARLLSPA
LTEIEAKPHTGLGLKAYSPVTSPLRRYADLVNQAQIMHFTFFQEPLFNKEEMENMLMNFN
IHNGLASQVQRSRPRYWRFVFIQQEAKRQGENCSFHGIISDENDMYVTVSLTREQILVRA
KRQLFGDKALLGQEVLVRLGKINPLLFEASIMNVQEL
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaaagtcggattgcttgttgaatttatgcaggacaacacccccacactcggc
tgtgtgttagatgagcagggaggaaaaatccgtttactgcttgccaacaggcgtgaaata
aatttaacgcaatcccgccttttgccatggattggtccaatcattcaagccacagccaaa
gaggatattgtttccggcttaatcgcgcataaggaacttcggcaaaagaccaaagaaaat
atcgacatcgccgaactttggaaaatgacacaaggcgaagtgacggaagaaagtgcggat
ttttttgcaggtctcatggaaaacaatatcaatcccgatattgtggcaggatacgcccac
gcccttttggaatgcaaaaattactttaaattccaaaacccgctttttgaagtttacagc
caagaaacagccgaagcgaaactgcttgccgaaaaacagcaaaaagaaaaaacagcgctt
gtttccggaggggctgactggtttaaacacctttgggatttatattgcaaacatcagcat
gtcacggataaggacaaggcgaaagaaccgcccgaaccggtcgcagccacgctgaaaggg
cttttgctcaagcatatggcggaaacggaaagccatgaagaaaaccttttgtggaaacaa
gttaccaaacaaattcccgatgaaacctatctcgcctattatcttgccgtaacatggaag
cttgttccggagcattataatttttggctgagcaaaatcgattatgacgaaaccgataac
ttcgctcttccctttgccgatgagctcgccgcaattcaggaacttgcgaaaaagctttca
gaaaaggaaaatttcaatcctttgcccttgcctcgggaacaaagccgatataaaaacgcc
ctgcactgttctctggacaaaaagcaggaactttgcggtattttttcttcaatagcgcaa
aaggaatttatcagtatcgacagcgcaagcacaaaagatattgacgatgcgttttctttt
gaagaacatgcggaccaaacaaaagaaatccatatcagtctcgcctgtcccgcttttttc
tggcagtttcaaagcgattttgataaaatcattgcaaaacgctgtacaagcatttatctt
ccagaaaaaaatctgcacatgctcccggaggagctctccaccaattcctttagtctggtt
gaaaatcaaatcaagccctccatgctgattaaggctgttttcaatgccgaaaacgaactt
atcgactgcggcatttctttttcccgtgtgcacgtttgtgataacctgcaatattctgcc
tgcgaagccgtgttgtctgaaactatttcccaaatagaagaagcaaaggaaacagtgcgg
cagtcttcctgccattatcctgtgaacgaagaacggtatgctcccgatgaaaacgctctt
gccaaagcgcgaaaatacggcgctctgcttgaaaaagcctatctttttgcagaagcgcat
atgcaaaaacgtattgaaaacggggctgtcatcatcgaacgtgacgaatacgatttatac
cttgaaggaaccggcagcaaaacgcaggttcatctggaaccgatgccacaaagccccaag
gcgcagcttattgtttccgaactcatggtcatcgccaattccattgccgccgattttgcg
gtttcccatgaaattccgttgtttttcaggacacagcacatcggtattccaaaagaaatg
gcaggaatttggaaaaagccagaagagatagccaaaatcgcccgtctgctcagccccgcc
cttacggaaatcgaggcgaaaccccatactggcttgggattgaaagcatacagtcctgtc
acttctcccctgcgccgttatgccgatttggtgaatcaggcgcaaatcatgcatttcacc
tttttccaagaacctcttttcaataaagaagaaatggaaaacatgcttatgaatttcaat
attcataacgggcttgcaagtcaggtccaacgcagcagaccccgttattggcgttttgta
ttcatacagcaagaggcaaagcgccaaggtgaaaattgctctttccatggcattatttct
gatgaaaatgatatgtatgtgaccgtaagcctgacgcgtgaacaaattcttgtgcgcgcg
aaaagacagcttttcggggataaagcactgcttgggcaagaggtgcttgtgcggcttgga
aaaatcaatccgcttctttttgaagcaagtatcatgaatgtacaggaattgtga
DBGET
integrated database retrieval system
