Taurinivorans muris: JBF11_09020
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Entry
JBF11_09020 CDS
T09798
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tmur
Taurinivorans muris
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmur03032
]
JBF11_09020
03036 Chromosome and associated proteins [BR:
tmur03036
]
JBF11_09020
03400 DNA repair and recombination proteins [BR:
tmur03400
]
JBF11_09020
DNA replication proteins [BR:
tmur03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JBF11_09020
Chromosome and associated proteins [BR:
tmur03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JBF11_09020
DNA repair and recombination proteins [BR:
tmur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JBF11_09020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
DUF5666
DUF5601
Motif
Other DBs
NCBI-ProteinID:
UWX05573
LinkDB
All DBs
Position
1952529..1952804
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIKSLSEQTNISIDEATLVVNTFVDNMKNALLEGDHVEIRGFGSFKVKEYGAYAG
RNPRTGQKVEVESKRLPFFRAGKELKEFLND
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagcgaacttattaaaagtttgtctgaacaaaccaacatttccatcgatgaa
gcgacattggttgtgaatacttttgttgataacatgaaaaatgcccttttggaaggtgat
catgttgaaattcgcggatttggaagttttaaagttaaagaatacggggcttatgccggg
cgtaatccacgtactggacaaaaagttgaagttgaatcaaaacgcttgcctttcttccgt
gccggtaaagaattaaaagaatttttaaacgattaa
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