Termitidicoccus mucosus: OH491_07955
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Entry
OH491_07955 CDS
T09991
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tmv
Termitidicoccus mucosus
Pathway
tmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH491_07955 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmv03019
]
OH491_07955 (rny)
Messenger RNA biogenesis [BR:
tmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OH491_07955 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
VTT_dom
KH_KhpA-B
LapA_dom
DUF4229
KH-I_KHDC4-BBP
DUF6187
DUF6286
Oleosin
SBDS_domain_II
DUF575
KH_2
Peptidase_S64
Trypco1
Motif
Other DBs
NCBI-ProteinID:
XAE58137
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Position
complement(2342506..2344092)
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AA seq
528 aa
AA seq
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MNLASVTADFAFIVAQGEMEPIWFFAVAAIVGVLLGMTISWLVTRYLRRAVAQQAEQLLE
VAKREAAVAANEIRQKAEEEIKDKRADLNREFDRREIETDIKLREIRAHEESLALLDYQL
EQKQDRLARETAAMQQARDSIRDLSKTMRQRIEGVSQMNPDEIKQTLRDEVMLECQDELR
ALKREMLERSEQDLQTQARRVLIATMQRLASKPNADITATIVQLPNEEMKGRIIGREGRN
IKAFEASTGVTLLIDETPQMVLISSFDPVRREIARIALESLVKDGRIHPASIEEAVARAG
EEVDLNVQQAGEDAVQRLGINGLHPDIIELLGKLKYRFSYTQNVLDHSIEVGFLCSMIAS
ELGLDPNLAKRAGLLHDIGKAVDGEYEGSHASIGADFVKRHGETPIVVNAIAAHHEEVKP
ETLYAGLVILADTISAIRPGARAEAMTSYIQRLDRLEKLAGELEGVQQAYAIQAGREIRV
VVSPQHVTDEQARELAKALRRRIEEELQYPSTIKITVIRESRFTEVAV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctagccagcgtcacagccgactttgcgtttatcgtggcccagggcgaaatggaa
ccgatctggtttttcgccgtggcggccatcgtcggcgtccttctgggcatgacgatctca
tggctggtcacgcgatacttgcgccgggcggtggcgcagcaggcggaacaattgctggag
gtggcgaaacgggaagcggcggtggcggcgaacgaaatccgccagaaggcggaggaggaa
atcaaggacaagcgggcggacctgaaccgggaatttgaccggcgcgaaatcgagaccgac
atcaagctgcgcgaaatccgcgcgcacgaggagtcgctcgcgctgctcgattatcagctc
gagcaaaagcaggaccgcctcgcccgcgagaccgccgccatgcagcaggcgcgcgactcc
atccgcgatctctcgaagaccatgcgccagcgcatcgaaggcgtgtcgcagatgaatccc
gacgaaatcaagcagacgttgcgcgacgaggtgatgctggagtgccaggacgaactgcgc
gccttgaagcgcgagatgctggagcgctcggagcaggacttgcagacgcaggcgcgccgc
gtgctcatcgccacgatgcagcgcctggcctcgaagcccaacgccgacatcaccgccacc
atcgtgcagttgcccaacgaggaaatgaaggggcgcatcatcggccgcgaggggcgcaac
atcaaggcgttcgaggcctccaccggcgtgacgctcctcatcgacgagacgccgcagatg
gtgttgatctcatccttcgacccggtgcgccgcgagatcgcccgcatcgcgctcgaaagc
ctcgtgaaggacgggcgcatccatcccgcgagcatcgaggaggccgtcgcccgcgcgggc
gaggaagtggacctgaacgtgcagcaggccggcgaggacgccgtgcagcgcctcggcatc
aacggcctgcatccggacatcatcgagctgctgggcaagctgaaataccgcttctcctac
acgcaaaacgtcctcgatcattccatcgaggtcggcttcctctgctcgatgatcgcgagc
gagctcgggctcgaccccaacctcgcgaaacgcgccggcctcctgcacgacatcggcaag
gccgtcgatggcgaatacgagggcagccatgcgagcatcggcgcggatttcgtgaagcgc
cacggcgagacgccgatcgtggtcaacgccatcgccgcgcaccacgaggaggtgaagccg
gagacgctttacgcggggctggtgatcctggccgacacgatttccgccatccgccccggc
gcgcgcgccgaggcgatgacgagttacatccagcgtctcgaccgcctcgaaaagctcgcc
ggcgaactcgagggcgtgcagcaggcctacgccatccaggccggccgcgagatccgcgtg
gtggtttcgccgcagcacgtcaccgacgagcaggcgcgcgagctggccaaggcgctgcgc
cggcgcatcgaggaggagctgcaatacccgagcaccatcaaaatcaccgtgatccgcgaa
tcgcgtttcacggaggtggcggtgtag
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