Termitidicoccus mucosus: OH491_09095
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Entry
OH491_09095 CDS
T09991
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tmv
Termitidicoccus mucosus
Pathway
tmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH491_09095 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmv03021
]
OH491_09095 (rho)
03019 Messenger RNA biogenesis [BR:
tmv03019
]
OH491_09095 (rho)
Transcription machinery [BR:
tmv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
OH491_09095 (rho)
Messenger RNA biogenesis [BR:
tmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OH491_09095 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
XAE58359
LinkDB
All DBs
Position
2643798..2645843
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AA seq
681 aa
AA seq
DB search
MESQAPHSGEPAAPKKKRATKARKTEEPTDTAIEPPPAPAKKPRAAKPRAKKHADADTTG
ELPLDDNAVPSEPTPPPAPAPTPAPAPAEAAPAERRPLFRTRRQRAAAPAPAAPEAESAP
AAKTAGQPEASRDDAPPAPPAADAPSAPSSAADAAPAGDTAPAPDAPAASEEQAAADTQQ
PQNSNGQQPYEPYWKKKKREKFAKKHGKWQPQGGGQPKHPAYPTQPPPPSLQPAYGDLPP
PDRFADPSALDALAAEITAPGAEPIYLDQLYALTLAELTASARIFGAAFEGAPNRKQLLA
AVFKHAAESKIPIIDRGYIDLTDRGHGFIVHANVNYRLYPENSYLPASLVTRYGLKRGHQ
VEVLVQAPRENERCPAVVRVDKVMGGAPGDISKVTPFEELTPYYPLKRILLEAPGVHKDV
SMRAVDILTPIGFGQRGLIVAPPRTGKTVILQNLANSISANFPGITLIILLIDERPEEVT
DFRRHTKGEVVSSTFDEAPENHVHCAEMVGEKARRLVEAGRHVVILLDSITRLARAYNAL
ASNSGKIMSGGMEATALQKPKRFFGAARNIEGGGSLTIMGTALIDTGSRMDEVIFEEFKG
TGNMELHLDRGLVEKRIFPAINIDRSGTRKEELIYHPDEMQRIYGLRRAMQGIPPIDAME
SFLKRLKQTKTNAEFLIGLNR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccaagccccacacagcggtgagcccgccgccccaaagaaaaaacgcgccacc
aaagcccgcaaaaccgaggaaccgacggacaccgccattgagccgccccccgctccggcc
aagaaaccccgcgccgccaagccccgcgccaaaaaacacgccgatgccgacaccaccggc
gaactgccccttgacgacaatgccgtgccgtccgaacccacgccgccgcctgcgcccgcg
cccactccggcccccgcgcccgcggaagcagcgcccgccgagcgccgcccccttttccgc
acccgccgccagcgcgcggccgcgcctgcgcccgccgctccggaagccgaaagcgccccc
gcggccaaaaccgccggccagcccgaagcctcgcgcgacgacgccccccccgcccctccc
gccgccgacgcgccatccgccccgtcgtccgcggccgatgccgcgcctgcgggcgacact
gcgcccgctcccgatgctccggcggcttccgaggaacaagcggcagccgacacccagcag
ccccagaacagcaacggccagcagccctacgagccgtattggaagaaaaagaaacgcgag
aaattcgccaagaagcacggcaaatggcagccgcaaggcggcggccagcccaagcatccg
gcgtatccgacgcagccgcccccgcccagcctccagccggcctacggcgaccttccgccc
cccgaccgctttgccgatccctccgcgctcgacgccctcgcggccgaaatcaccgcgccc
ggcgccgagcccatctacctcgaccagctctacgcgctcaccctcgccgagctgaccgcc
tccgcgcgcatcttcggcgccgcgttcgaaggcgcgcccaaccgcaagcaactcctcgcc
gccgtcttcaagcacgcggccgaaagcaaaattcccatcatcgaccgcggctacatcgac
ctcaccgaccgcggccacggcttcatcgtccacgccaacgtcaactatcgtctgtatccg
gaaaattcatacctccccgccagcctcgtcacccgctacggcctcaaacgcggccaccag
gtcgaggtgctcgtgcaggccccgcgcgaaaacgaacgctgccccgccgtcgtccgcgtc
gacaaggtcatgggcggcgcgcccggcgacatttccaaggtcacgcccttcgaggaactc
acgccctactacccgctcaagcgcatcctcctcgaggcgcccggcgtgcacaaggacgtc
tccatgcgcgccgtggacatcctcacgcccatcggcttcggccagcgcggcctcatcgtc
gccccgccccgcaccggcaagaccgtgattctccaaaacctggccaactcgatctcggcg
aatttccccggcatcacgctcatcatcctcctcatcgacgagcgccccgaggaagtcacg
gacttccgccgccacaccaagggcgaggtcgtcagctccaccttcgacgaggcgccggaa
aaccatgtccactgcgccgagatggtcggcgaaaaagcccgccgcctcgtcgaggccggc
cggcacgtcgtcatcctcctggactccatcacccgcctcgcccgcgcctacaacgccctc
gcctccaactccggcaagatcatgtcaggcggcatggaggccacggcgctgcaaaagccg
aagcgcttcttcggtgccgcgcgcaacatcgagggcggcggctcgctcaccatcatgggc
accgcgctcatcgacaccggcagccgcatggacgaggtcatcttcgaggagttcaagggc
accggcaacatggagctgcacctcgaccgtggcctcgtcgagaaacgcattttcccggcc
atcaacatcgaccgctccggcacgcgcaaagaggagctcatctaccaccccgacgagatg
cagcgcatctacggcctgcgccgcgccatgcaaggcatcccgcccatcgacgcgatggaa
tccttcctcaagcgcctgaaacaaaccaaaaccaacgccgaattcctgataggcctcaac
cggtaa
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