Termitidicoccus mucosus: OH491_14190
Help
Entry
OH491_14190 CDS
T09991
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tmv
Termitidicoccus mucosus
Pathway
tmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH491_14190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmv03019
]
OH491_14190
Enzymes [BR:
tmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OH491_14190
Messenger RNA biogenesis [BR:
tmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OH491_14190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XAE54082
LinkDB
All DBs
Position
complement(4012829..4014397)
Genome browser
AA seq
522 aa
AA seq
DB search
MSKIRETLAPSKKKPAASKTGGQSSSKSSSRNEGGQGRRHDKPRFDDSRPRGEKRRDGRR
DRDPQQQRSGGGAGKRSGSLGARGSRDGGRSDRGEPRAPQGERYEPPLRSGPRKQIADVP
PQDTAFSKLGLNDRVAYAAAQKGYTEPTPIQAQAIPHILAGRDVAGSAQTGTGKTAAFAL
PILQRLGAHGRLRCLVLEPTRELALQVEEAFNKYSQYTDLDVTIVYGGVGYGRQRDDLAR
GVDILAATPGRLLDHMEQGTVSLDHIEVLVLDEVDRMLDMGFLPDVKRIVQKCPRERQTL
FFTATLPPEITQLASWALRDPVEVKIGRQRTPAETVSHAFYPVVVSQKPDLLDELLRRTD
FHSVIIFSRTKFGADRIARRLARAGHTVGVLHSDRNQRERTEALAGFKSGKYEVLVATDI
AARGLDIADVSHVINYDVPENPEDYVHRIGRTGRAQKTGEAFTLVTEDDVRDARSIERFI
NASIERKKLDGFDYIYSALFDENAQQDTAPKPASRLHRGLRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattcgcgagacgctcgcgccttcgaaaaaaaagccggccgccagcaagacc
ggcggacaatcctcttccaaatcctcctcccgcaacgaaggcgggcagggccgtcgccac
gacaaaccgcgctttgacgattcccgtccgcgcggcgaaaaacgccgcgacggcaggcgc
gaccgcgacccgcagcagcagcgctccggcggcggcgcgggaaaacgctccggctccctc
ggcgcccgcggttcgcgcgacggaggacgttccgaccgcggcgagccccgcgccccgcag
ggcgaacgctacgagccgccgctccgcagcggcccgcgcaaacaaatcgccgacgtgcct
ccgcaggacaccgcgttttccaagctcggcctcaacgaccgcgtcgcctacgccgccgcc
caaaaaggctataccgagcccacgcccatccaggcgcaggccatcccgcacatcctcgcc
ggccgcgacgtggccggctccgcgcagaccggcaccggcaagaccgccgccttcgccctg
cccatcctccagcgcctcggcgcgcacggccgcctccgctgcctcgtcctcgagcccacc
cgcgaactcgcgcttcaggtcgaggaggcgttcaacaaatacagccagtacaccgacctt
gacgtcaccatcgtgtatggaggagtcggatacggacgccagcgcgacgacctcgcccgc
ggcgtggacatcctcgccgccacgcccggccgcctgctcgaccacatggagcagggcacc
gtctcgctcgaccacatcgaggtcctcgtgctcgacgaggtggaccgcatgctcgacatg
ggcttcctgcccgacgtgaagcgcatcgtgcaaaaatgcccgcgcgaacggcagacgctt
ttcttcaccgccacgctcccgcccgagatcacccagctcgcctcgtgggccctgcgcgat
cccgtcgaggtgaaaatcggccgccagcgcacgcccgccgagaccgtctcgcacgcgttc
tatcccgtcgtcgtctcgcaaaaacccgacctcctcgacgagcttctccggcgcaccgat
ttccacagcgtcatcattttcagccgcacgaaattcggcgccgaccgcatcgcgcggcgc
ctcgcgcgcgccggccacaccgtcggcgtgctccactccgaccgcaaccagcgcgagcgc
accgaggcgctcgcgggcttcaagtccggcaaatacgaggtgctcgtcgcgaccgacatc
gccgcccgcggcctcgacatcgcggacgtctcgcacgtcatcaactacgacgtgcccgag
aatcccgaggactacgtgcatcgcatcggacgcacgggccgcgcgcaaaaaaccggcgag
gccttcaccctcgtcaccgaggacgacgtgcgcgacgcgcgctccatcgagcgcttcatc
aacgccagcatcgagcgcaagaaactcgacggcttcgactatatctattccgcgctcttc
gacgaaaacgcgcagcaggacaccgcgcccaagcccgccagccgcctccaccgcggcctg
cgacgttaa
DBGET
integrated database retrieval system
