Termitidicoccus mucosus: OH491_14225
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Entry
OH491_14225 CDS
T09991
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tmv
Termitidicoccus mucosus
Pathway
tmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OH491_14225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmv03019
]
OH491_14225
03009 Ribosome biogenesis [BR:
tmv03009
]
OH491_14225
Enzymes [BR:
tmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OH491_14225
Messenger RNA biogenesis [BR:
tmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OH491_14225
Ribosome biogenesis [BR:
tmv03009
]
Prokaryotic type
rRNA helicases
OH491_14225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
XAE54089
LinkDB
All DBs
Position
complement(4020978..4022840)
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AA seq
620 aa
AA seq
DB search
MQHLRFAELGLSPEILKAVDKMGFEETSPIQTAAIPPILEGRDLVGQSSTGSGKTAAFAI
PAVEKTDPKNRAVQVLVLCPTRELAVQVSEEVAKISLFKRGVHAVPIFGGQSYERQFRAL
ASGVQIVIGTPGRVLDHMERGTLKLDSLKLLVLDEADRMLDMGFREDIERVLSQAPAERQ
FLFFSATMPRAIQELIRRYSRDPQWVKIEAQAQNAPKVDQVYFEVERRSKLEVLTRLIDM
HDFSYGIVFCSTKIMVDELNDHLQARGYAVERLHGDISQAQRTRVMEKFRRRGFEFLIAT
DVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGKSGRAFTFVSGRELYKLQSMVR
YGKLNLRRERVPSLDLVEEARENQFFEKLRATLDDGAFAKQDRIIDRLLEQGYTSTDIIA
ALIHIMQGDGKPAAAPKKQEREPCDNGGTASVPSAARQRAQRDTGVPPVDGAPRRQSQDH
GQAARAAPRDAAAAPANRARDKHDLAQTFSPEDDTCDPGEPGPARPSKQKYERPARTGRE
AGFATLFFNVGRKDLVTPADIVGKVTGVTRLPASVVGAIDIHQRHTLVDVDENEAAFIVQ
KMEGIRVKGAVLKPALADMS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacctgcgcttcgccgaactcgggctttcccccgaaatcctcaaggccgttgac
aagatgggcttcgaggagacctcgcccatccagacggccgccatcccgcccatcctcgaa
ggccgcgacctcgtcggccagtcctccaccggctcgggcaagaccgccgcgttcgccatt
cccgccgtcgaaaaaaccgacccgaaaaaccgcgccgtccaggtgctcgtgctctgcccc
acgcgcgagctcgccgtgcaggtctccgaggaggtcgccaaaatctcgctcttcaagcgc
ggcgtgcacgccgtgcccattttcggcggccaatcctacgagcgccagttccgcgccctc
gcctccggcgtgcaaatcgtcatcggcacgcccggccgcgtgctcgaccacatggagcgc
ggcacgctcaagctcgactcgctcaagctgctcgtgctcgacgaggccgaccgcatgctc
gacatgggcttccgcgaggacatcgagcgcgtgctctcgcaggcgcccgccgagcggcag
ttcctgtttttctctgccacgatgccgcgcgccatccaggagctcatccgccgctacagc
cgcgacccgcaatgggtgaaaatcgaggcgcaggcgcaaaacgccccgaaggtggaccag
gtttatttcgaggtcgagcgccgctcgaaactcgaggtgctcacgcgcctcatcgacatg
cacgacttcagctacggcatcgtattctgctccacgaaaatcatggtggacgagctcaac
gaccacctgcaggcgcgcggctacgcggtcgagcggctgcacggcgacatctcgcaggcg
cagcgcacgcgcgtgatggaaaaattccgccgccgcggtttcgaatttctcatcgccacc
gacgtcgccgcccgcggcctcgacgtggacgacctcgaggtcgtcttcaacttcgacctc
cccaacgacgccgaggactacacgcaccgcatcggccgcaccggccgcgccggcaagtcc
ggccgcgccttcaccttcgtctccggccgcgagctctacaaactccagtcgatggtgcgc
tacggcaaactcaacctccgccgcgaacgcgtcccctcgctcgacctcgtggaggaggcg
cgcgaaaaccagtttttcgaaaaactccgcgccacgctcgacgacggcgccttcgcgaaa
caggaccgcatcatcgaccgcctgctcgagcaaggctacaccagcaccgacatcatcgcc
gcgctcatccacatcatgcagggcgacggcaagcccgccgccgcgccgaaaaaacaagag
cgcgagccctgcgacaatggagggacggcctccgtgccgtccgccgcgcgccagcgcgcc
caacgtgacacgggcgtcccccccgtggacggcgctccgcgccgccagtcccaagaccac
ggccaggctgcccgcgccgcgccgcgcgatgccgccgccgcgccggcaaaccgcgcccgc
gataaacacgacctcgcgcaaaccttctcccccgaggacgacacttgcgatcccggcgag
ccgggtcctgcccgcccctcgaaacagaaatacgagcgccccgcgcgcacgggccgcgag
gcgggcttcgctacgctgtttttcaacgtcggacgcaaagacctcgtcacgccggcggac
atcgtgggcaaggtcaccggcgtcacgcgcctgcccgccagcgtcgtcggcgccatcgac
atccaccagcgtcacacgcttgtcgatgtggacgaaaacgaggcggccttcatcgtgcaa
aaaatggaaggcatccgcgtcaagggcgccgtgctcaagccggccctcgccgacatgtca
tag
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