Termitidicoccus mucosus: OH491_20345
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Entry
OH491_20345 CDS
T09991
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tmv
Termitidicoccus mucosus
Pathway
tmv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OH491_20345 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmv03021
]
OH491_20345 (rpoC)
03400 DNA repair and recombination proteins [BR:
tmv03400
]
OH491_20345 (rpoC)
Enzymes [BR:
tmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OH491_20345 (rpoC)
Transcription machinery [BR:
tmv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OH491_20345 (rpoC)
DNA repair and recombination proteins [BR:
tmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OH491_20345 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
XAE55269
LinkDB
All DBs
Position
5798089..5802246
Genome browser
AA seq
1385 aa
AA seq
DB search
MSIQPNETAGGSIAREEARSALGLDESPFDCVTITVAAPETIRNWSRGEVKNPETINYRT
FKPEPGGLFCQKIFGPVRDYECACGKYKRIKYKDVICDRCGVEVTISRVRRERMGHIELS
VPVAHIWFLKSMPSRLGLLLDMTARALERVIYYENYMVIDPGRTPLEPKQLLTDVEYRQA
LDEYGDDSFVAKMGAEAVREALVAMDMDATVAELQEQMRATRSKQIKKKLSKRLKVIQGF
IQSKSRPEWMVLEVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLMQLKT
PDVIIHNEKRMLQEAVDALFDNGRHGRPVTGAGNRPLKSLSDMLKGKQGRFRQNLLGKRV
DYSGRSVIVIGPELKLSQCGLPKKMALVLFEPFIIRRLKELGFVHTVRGARKMIEKKSPE
VWDILEEVTKGHPVLLNRAPTLHRLSIQAFEPVLIEGEAIRVHPLVCTAYNADFDGDQMA
VHVPLSLEAIMECKLLMMATSNIFSPSSGKPILTPSQDIVLGSYYLTIEPRKKPAQGQRV
PLLSGLQEVLFAKAEGDLKVHDWVDVPNPDYGKDSVYGNKDRKVVRTTVGRVIFNQIWPE
GLGFVNFPVPKGKLGDLILNTYKVTGNYVTVETLDRLKELGFQTAFQAGISIGIDDMIIP
ESKKDIVADSRRKIAEVDAQFNKGIITDGERKNKVIDIWTSATDQIAKAVFSKLEGNEGR
NEVNPVYIMMDSGARGNKQQVRQLCGTRGLMAKPSGEIIERPILSSFREGLTVLEYFIST
HGARKGLADTALKTADAGYLTRKLCDVAMDVVIAEDDCGTRDGVWKKAIFEGDDEIVGLR
ERIIGRFSSDDVYDPLNPTERLVGSGELITEEIAAKIDESGIERVKIMSPLTSTSKYGID
GKSYGINPATNRVAKIGDSVGIIAAQSIGEPGTQLTMRTFHIGGVASGGFKVPEIRVRAS
GIVKYKGLRLVETADGAAIVLNKTGTIEIVDEAGEELETHNIVIGSFLHVHDGAKIEKNA
ILAQWDPYNIPVLSEKGGSLVFKDMIPGVTVKRELDESSGRIATVVVEHKEDLNPQIEVR
DVSGKPLAAYSIPVGAQIAVNEGDTIAPGALLAKTPRQASKTKDITGGLPRVAELFEARR
PKDAAEMARIEGVVSFEGSVRGKRKLVVTNSETSQEEEHLIPAGKHIIVQPGDVVHKGQH
LTEGAADPHEILEILGPSALYDFLISQVQEVYRLQGVTINDKHIEIIIRQMLRKVRISDP
GDSEYFWGEQIDRTTFLLNNKRIEEAGGKPAEAEPILLGITKASLETESFISAASFQETT
RVLTDASTLGKVDMLKGFKENVIMGHLIPAGTGLPAYKHLKVTLPFGTDIPEAPAAEEEV
QVEAS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcaacccaacgaaaccgccggtggctccatcgcccgtgaggaagcccgctcg
gcccttggcctcgacgagagcccgttcgattgcgtcaccatcaccgtggccgccccggag
accatccgcaactggtcccgcggcgaggtgaaaaacccggaaaccatcaactaccgcacc
ttcaagcccgagccgggcggcctcttctgccagaagatcttcggccccgtccgcgactac
gagtgcgcctgcggcaaatacaagcgcatcaaatataaggacgtcatctgcgaccgctgc
ggcgtcgaggtcaccatctcccgcgtccgtcgcgaacgcatgggccacatcgagctctcc
gtgccggtcgcgcacatctggttcctcaagtcgatgcccagccgcctcggcctgctcctc
gacatgaccgcgcgcgccctcgagcgcgtcatctattacgagaactacatggtcatcgac
ccgggccggaccccgctcgaacccaagcagctcctcaccgacgtcgaataccgccaggcc
ctcgacgaatacggcgacgattccttcgtcgccaagatgggcgccgaggccgtgcgcgag
gccctcgtcgcgatggacatggacgccacggtcgccgagctccaggagcagatgcgcgcc
acccgctccaagcagatcaagaaaaaactctccaagcgcctcaaggtcatccaaggcttc
atccagtccaagtcgcgccccgagtggatggtgctggaagtcctccccgtcatcccgccg
gacctgcgcccgctcgtcccgctcgaaggcggccgcttcgccacctccgacctcaacgac
ctctaccgccgcgtcatcaaccgcaacaaccggttgaaaaacctcatgcagctcaagacg
cccgacgttatcatccataacgaaaagcgcatgctgcaggaagccgtggacgccctcttc
gacaacggccgccacggccgccccgtcaccggcgccggcaaccgccccctcaagtccctt
tccgacatgctcaagggcaagcagggccgcttccgccaaaacctcctcggcaagcgcgtc
gattattccggccgctccgtcatcgtcatcggccccgagctcaagctcagccagtgcggc
ctcccgaagaaaatggcgctcgtccttttcgagcccttcatcatccgccgcctgaaggag
ctgggcttcgtgcacaccgtgcgcggcgcccgcaagatgatcgagaagaagtcccccgag
gtctgggacatcctcgaggaagtcaccaagggccaccccgtgctcctcaaccgcgcgccc
acgctgcaccgcctttcgatccaggccttcgagcctgtcctcatcgagggcgaggccatc
cgcgtgcacccgctcgtctgcaccgcctacaacgccgacttcgacggcgaccagatggcc
gtgcacgtgccgctctccctcgaggcgatcatggagtgcaaactcctcatgatggccacg
agcaacatcttctcgccgtcctccggcaagcccatcctcacgccctcgcaggacatcgtg
ctcggctcctattatctcaccatcgagccccgcaagaaacccgcccaaggccagcgcgtg
ccgctgctctccggccttcaggaagtcctcttcgccaaggccgagggcgacctcaaggtg
catgactgggtcgatgtcccgaatcccgattacggcaaggacagcgtttacggcaacaag
gaccgcaaggtcgtccgcaccaccgtcggccgcgtcatcttcaaccagatctggcccgaa
ggactcggcttcgtgaacttccccgtcccgaagggcaagctcggcgacctcatcctcaac
acctacaaagtcacgggcaactacgtcaccgtcgagacgctcgaccggctcaaggaactc
ggtttccagaccgccttccaggccggcatctccatcggcatcgacgacatgatcatcccc
gagtccaagaaggacatcgtcgccgactcccgcaggaagatcgccgaggtggacgcccag
ttcaacaagggcatcatcaccgacggcgagcgcaagaacaaggtcatcgacatctggacc
agcgccaccgaccagatcgccaaggccgtgttctcgaagctcgaaggcaacgaaggccgc
aacgaggtcaacccggtttacatcatgatggactccggcgcccgcggcaacaagcagcag
gtccgccagctctgcggcacccgcggcctcatggccaagccctccggtgaaatcatcgag
cgcccgatcctctcgtccttccgcgagggccttaccgtgctcgaatacttcatctccacc
cacggcgcccgcaagggcctcgccgacaccgccctcaagaccgccgacgccggctacctc
acccgcaaactctgcgatgtggccatggacgtcgtcatcgccgaggacgactgcggcacc
cgcgacggcgtgtggaagaaagccatcttcgaaggcgacgacgaaatcgtcggcctgcgc
gagcgcatcatcggccgcttttccagcgacgacgtttacgacccgctcaacccgaccgag
cgcctcgtcggctccggcgagctcatcaccgaggaaatcgccgccaagatcgacgagtcc
ggcatcgagcgcgtcaaaatcatgtcgccgctcacctccacgagcaaatacggcatcgac
ggcaaatcctacggcatcaaccccgccaccaaccgcgtggccaagatcggcgactccgtc
ggcatcatcgccgcgcagtccatcggcgagcccggcacgcagctcaccatgcgcaccttc
cacatcggcggtgtcgcgtccggtggcttcaaggttcccgagatccgcgtccgcgcctcc
ggcatcgtcaaatacaagggcctccgcctcgtggagaccgccgacggcgccgccatcgtg
ctcaacaagaccggcaccatcgagatcgttgacgaggcgggcgaggagcttgagacgcac
aacatcgtcatcggctccttcctccacgtccacgacggcgcgaagatcgagaaaaacgcc
atcctcgcccagtgggacccgtataacatccccgtgctctccgagaagggcggctccctt
gtattcaaggacatgataccgggcgtgaccgtgaagcgcgagctcgacgagtcctccggc
cgcatcgcgaccgtcgtcgtcgagcacaaggaggacctcaacccgcagatcgaggtccgc
gacgtctccggcaagccgctcgccgcctactcgattcccgtcggcgcgcagatcgccgtc
aacgagggcgacaccatcgcccccggcgcgctccttgcgaagaccccgcgccaggcctcc
aagaccaaggacatcaccggcggtcttccccgcgtggccgagctcttcgaagcccgccgc
ccgaaggacgccgccgagatggcccgcatcgagggcgtggtttccttcgagggttccgtc
cgcggcaagcgcaagctcgtcgtgacgaactccgagacctcgcaggaggaggagcacctc
atccccgccggcaagcacatcatcgtgcagcccggcgacgtcgtgcacaaaggccagcac
ctcaccgagggcgccgccgacccgcatgagatcctggaaatcctcgggcccagcgcgctc
tacgacttcctcatctcgcaagtgcaggaagtttaccgcctgcaaggcgtgacgatcaac
gacaagcacatcgagatcatcatccgccagatgctgcgcaaagtccgcatctccgatccg
ggcgacagcgaatacttctggggcgagcagatcgaccgcacgaccttcctcctcaacaac
aagcgcatcgaggaagccggtggcaagcccgccgaggccgagccgattctcctcggcatc
acgaaggcctcgctcgagaccgagtcgttcatcagcgcggcctccttccaggaaacgacg
cgcgtcctcaccgacgcctcgaccctcggcaaggtggacatgctgaaaggcttcaaggaa
aacgtgatcatgggtcacctcatccccgccggcaccggcctgcccgcctacaagcacctc
aaggtgacgcttcccttcggcaccgacatccccgaggcgcctgcggccgaggaagaggtg
caagtcgaggccagttga
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integrated database retrieval system
