Termitidicoccus mucosus: OH491_26230
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Entry
OH491_26230 CDS
T09991
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tmv
Termitidicoccus mucosus
Pathway
tmv03030
DNA replication
tmv03430
Mismatch repair
tmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OH491_26230 (dnaE)
03430 Mismatch repair
OH491_26230 (dnaE)
03440 Homologous recombination
OH491_26230 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmv03032
]
OH491_26230 (dnaE)
03400 DNA repair and recombination proteins [BR:
tmv03400
]
OH491_26230 (dnaE)
Enzymes [BR:
tmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OH491_26230 (dnaE)
DNA replication proteins [BR:
tmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OH491_26230 (dnaE)
DNA repair and recombination proteins [BR:
tmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OH491_26230 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XAE56406
LinkDB
All DBs
Position
complement(7479346..7483023)
Genome browser
AA seq
1225 aa
AA seq
DB search
MRSPLDTVSAPAKDFVHLHVHTDRSLLDGCCRIDRLVDYAASLGQTALALTDHGNLYGVI
DFYTETKKKNIKPLIGCEIYLVEGSRLDKNGRAEEGKSWYHLGLLARNLEGYQNLLKLVS
DAHLRGFYYKPRADWETLAKYSGGLIAFSGCLAAIVPQHLLHGREEEARKAAARFIDIFG
RENFIIELQDHGLPEQRKIIPGLLKIAEEFNLTVIASNDVHYVRATDAAPHDAMLCIQTG
AKLDDPDRMRFDTQEFYLKSHDEMAKLFAEVPESITNTRLVAEMCDLAIPFPKGSERYPR
YPLPPEINSKYSPSEYLLQLCIAGLHRRYGTDHAAVSQHPVVAERLAKLQNLPPGEKPQP
PDYSGLTHDELLVVRMAYELSIINVTGFVDYFLVVWDFINWAKEHGIPVGPGRGSGAGCL
VAYTLGITNLDPIRFGLLFERFLNPERVSPPDFDIDFCMRRREEVIDYVREKYGRDCVAN
IITYGTLGAKMALRDIARVNNLPFAESDRLAKMIPDELNISLSDSIAKSAELAGEIARNP
VAKRIIDTALVVEGMVRNTGKHAAGIIITDKPLDEFVPLSLQEEDVTVQYDMGAVTKLGL
LKMDFLGLKTLTVIADAVDNVRATVPGQQKFDIDAIPLDDPKTYELLNAGKTVGVFQLES
TGMQNASRQVGISTIDDINAISALYRPGPMQFIPDYARGKKDPSSIVWPHPLLKPILTET
FGIIVYQEQVMECARIIAGYSLGGADMLRRAMGKKDAEAMAKERVKFVEGAKRVNNIDEK
KANEIFDLLNKFAQYGFNKSHSAAYALIAYQTAYLKANHPVQFMAAVLTAELGNAEKVSH
FISEAESMGITVLGPDVNESGSNFTPVGGKIRFGLAGVKGVGEQAALKIIEERSANGPYD
DFDHLVNRVDGRAINKRVLEHLVKTGAFDYSGASRKQLFDGIDAALAAAASTARDRAAGQ
SSLFDLLAEPQPSLGKRGQGTIENRKSKIENSPPDFAPAERLQFEKELLGFYVSGHPLNT
YAGLLEAIDTCDITRLLELGDRMEFRICGIAGAVGKKLSKKDNRPWSPFVLSTKTASLPI
NMFANAYAEYGANLGENALVVVLGNILVGQEGPRVNLKELYPLENYVPGVIRKVRWLLRP
DHPEAPDFLRTLRATIDKNTGTTHTDIAFLFEDRVATISEASTALAWKLHPDTYHALRQH
PAVAGVQIEVKPLELKQERRWGRRG
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
gtgcgttcccctttggacactgtgtccgctcccgccaaagacttcgtccatctccacgtc
cacaccgaccgcagcctcctcgacggctgctgccgcatcgaccggctcgtggattacgcc
gccagcctcggacagaccgccctcgccctcaccgaccacggcaacctctacggtgtcata
gacttctataccgagaccaaaaagaaaaacatcaagcccctcatcggctgcgagatctac
ctcgtcgaaggttcgcggctcgacaaaaacggacgcgccgaggagggcaaatcctggtat
cacctcggcctgctcgcccgcaaccttgagggctaccagaacctcctcaagctcgtctcc
gacgcccacctccgcggcttctactacaagccgcgcgccgactgggaaacgctcgccaag
tattccggcggcctcatcgccttcagcggctgcctcgccgccatcgtcccgcagcacctc
ctgcacggccgcgaggaagaggcccgcaaggccgccgcgcgctttatcgacattttcggg
cgcgaaaacttcatcatcgagcttcaggaccacggcctccccgagcagcgcaaaatcatc
cccggcctcctcaaaatcgccgaggaattcaacctcaccgtcatcgcctccaacgacgtc
cactacgtccgcgccaccgacgccgccccgcacgacgccatgctctgcatccagaccggc
gccaagctcgacgaccccgaccgcatgcgtttcgacacgcaggagttttacctgaaatcg
cacgacgagatggccaagctcttcgccgaggtgcccgagtccatcaccaacacccgcctc
gtcgccgagatgtgcgacctcgccatccccttccccaagggctccgagcgctacccgcgc
tatccgctcccgcccgagatcaattccaagtattcaccctccgaatacctgcttcaactt
tgcatcgcgggcctccatcgccgctacggcaccgaccacgccgccgtcagccagcacccg
gtcgtcgccgagcgcctcgccaaactccaaaatctcccgcccggcgaaaagccccagccc
cccgactactccggcctcacccacgacgaactcctcgtcgtgcgcatggcctacgaactc
tccatcatcaacgtcaccggcttcgtggactacttcctcgtcgtctgggacttcatcaac
tgggccaaggagcacggcatccccgtcggccccggacgcggctccggcgccggttgcctc
gtcgcctacacgctcggcatcaccaacctcgaccccatccgtttcggcctcctcttcgag
cgcttcctcaaccccgagcgcgtctccccgcccgacttcgacatcgacttctgcatgcgc
cgccgcgaggaggtcatcgactacgtccgcgagaaatacggccgcgactgcgtggccaac
atcatcacctacggcacgctcggcgcgaaaatggccctccgcgacatcgcccgcgtcaac
aacctccccttcgccgagtccgaccgcctcgcgaagatgatccccgacgagctcaacatc
tccctctccgactccatcgcgaaatccgccgagctcgccggcgagatcgcccgcaacccc
gtggccaagcgcatcatcgacaccgccctcgtcgtcgaaggcatggtgcgcaacaccggc
aagcacgctgccggcatcatcatcaccgacaagccgctcgacgaatttgtccccctctcc
ctccaggaggaagacgtcaccgtccaatacgacatgggcgccgtcaccaagctcggcctg
ctcaagatggacttcctcggcctgaaaaccctcaccgtcatcgccgacgccgtcgacaac
gtccgcgccaccgtccccggacagcagaaattcgacatcgacgccatcccgctcgacgac
ccgaagacctacgaactgctcaacgcgggcaagaccgtcggcgtgttccagctcgaatcc
accggcatgcagaacgcctcgcgccaggtcggcatctccaccatcgacgacatcaacgcc
atctccgcgctctaccgccccggcccgatgcagttcatccccgactacgcgcgcggcaaa
aaagacccctcctccatcgtctggccccacccgctcctcaagcccatcctcaccgagacc
ttcggcatcatcgtctatcaggagcaggtcatggagtgcgcccgcatcatcgccggctat
tccctcggcggcgccgacatgctccgccgcgccatgggcaaaaaggacgccgaggccatg
gccaaggaacgcgtcaaattcgtcgaaggcgccaagcgcgtgaacaacatcgacgagaaa
aaagccaacgagatcttcgacctgctcaacaaattcgcccaatacggcttcaacaagtcg
cattccgcggcctacgccctcattgcctaccagaccgcctacctgaaggccaaccacccc
gtccaattcatggccgccgtgctcaccgccgagctcggcaacgccgaaaaagtctcccac
ttcatctccgaggccgagtccatgggcatcaccgtcctcggccccgacgtcaacgagtcc
ggctccaacttcacccccgtcggcggcaagatccgcttcggcctcgccggcgtgaaaggc
gtcggcgagcaagccgctctgaagatcatcgaggaacgctccgccaacgggccctacgac
gacttcgaccacctcgtcaaccgcgtcgatggccgcgccatcaacaagcgcgtcctcgag
cacctcgtgaagaccggcgcgtttgattacagcggcgcgtcccgcaagcaactcttcgac
ggcatcgacgccgcgctggccgccgccgcgtccaccgccagggaccgcgccgccggccag
tccagcctcttcgacctcctcgccgagccccagccttccctcggaaaacgcggacaggga
acaatcgaaaatcgaaaatcgaaaatcgaaaattctcccccggatttcgccccggcggaa
cgcctccaattcgaaaaggagcttctcggcttctacgtcagcggccatccgctcaacacc
tacgccggcctcctcgaggcgatcgacacctgcgacatcacccggctcctcgaactcggc
gaccgcatggaattccgcatctgcggcatcgccggcgcggtcggcaagaaactctccaaa
aaagacaaccgcccctggtcgcccttcgtcctctcgaccaagaccgccagcctgcccata
aacatgttcgccaacgcctacgcggaatatggcgccaacctgggcgagaacgccctcgtg
gtcgtcctcggcaacatcctcgtcggccaggaggggccccgcgtgaacctgaaggaattg
tatccactggaaaactacgttcccggcgtcatcaggaaagtccgctggctcctgcgcccc
gatcatcccgaagcgccggattttctgcgcacgctccgcgcgaccatcgacaaaaacacg
ggcaccacgcacacggacatcgccttcctcttcgaggaccgggtcgcgacgatttccgag
gcctcgacggcgctggcctggaaactccatcccgacacctaccacgccctccgccagcat
cccgccgtcgccggggtccagatcgaggtcaagccccttgagctgaaacaagagcgccgc
tggggccggaggggatag
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