Thermotoga maritima MSB8: THMA_0854
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Entry
THMA_0854 CDS
T03902
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tmw
Thermotoga maritima MSB8
Brite
KEGG Orthology (KO) [BR:
tmw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmw03032
]
THMA_0854 (gyrB)
03400 DNA repair and recombination proteins [BR:
tmw03400
]
THMA_0854 (gyrB)
Enzymes [BR:
tmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
THMA_0854 (gyrB)
DNA replication proteins [BR:
tmw03032
]
Prokaryotic type
DNA Topoisomerases
THMA_0854 (gyrB)
DNA repair and recombination proteins [BR:
tmw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THMA_0854 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
CofC
HATPase_c_3
UBA_N4BP1_C
Motif
Other DBs
NCBI-ProteinID:
AKE28613
UniProt:
P77993
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All DBs
Position
857673..859583
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AA seq
636 aa
AA seq
DB search
MEKYSAESIKVLKGLEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSVDEALAGYCDWIRVT
LHEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKISGGLHGVGVSV
VNALSEWLEVRVHRDGKIYRQRYERGKPVTPVEVIGETDKHGTIVRFKPDPLIFSETEFD
PDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVKYLNRGKKALHDVIHIK
RTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGTHVTAFKSTLTRLMNEY
GKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLGNEEVKEAVTKAMREEL
KKIFDANPELVKTILSKIMSTKQAREAAKRAREMVRRKNVLQNTTLPGKLADCSSTHREK
TELFIVEGDSAGGSAKQARDREFQAVLPIRGKILNVEKSSLDRLLKNEQISDIIVAVGTG
IGDDFDESKLRYGRIIIMTDADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIALPPLYRIK
AGREEFYVYSDQELAEYKEKLQGKRIEIQRYKGLGEMNPEQLWETTMNPETRKIIRVTIE
DAEEADRLFEILMGNDPSSRREFIERHALKVKELDI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtactccgctgaaagtataaaggttttaaaaggactggaacctgtccgaatg
cgacccggaatgtacataggatccacgggcaaacgtggattgcatcacctcgtgtacgaa
gtggttgacaacagtgttgatgaggcactcgctggatactgcgactggatacgtgtgact
ctccatgaagatggaagtgtggaagtcgaggacaacggaaggggaatccccgttgacata
catccagaagagggaagaagcgctctggaagtggttttcacagttcttcatgcgggcgga
aaattctccaaggattcctacaagataagcggtggcctgcacggtgttggtgtatcggtg
gtgaacgctctttcggagtggctggaagtgcgggtacatcgtgacgggaagatctacaga
caaagatacgaaaggggtaaaccggtcacacctgtggaagtgataggagaaaccgataag
cacggcacgatcgttcgattcaaacccgatcctctcatattttcggagacagagttcgat
cccgacatactcgaacacagattgagagagatagctttcctagtaccaggactcaaaata
gaattcgaagacagaataaacggagagaagaaaaccttcaaattcgacggaggcatagtg
gagtatgtgaagtatttgaaccgtgggaaaaaagctctacacgatgtgatacacataaag
agaacggaaaaagtgaaaacaaaaaatggtgaagacgaagtgatagtggagatcgccttt
caatacactgattcgtattctgaagatatcgtgtcttttgcaaacaccataaaaactgtc
gatggtggaactcatgttacagcctttaagagcaccctcacaagactcatgaacgagtat
gggaaaaaacataattttctcaagaaagacgattccttccagggtgaggatgttagagaa
ggcctcacggcggttatcagtgtttacgtgaagaaccccgaattcgaagggcaaacaaag
tcaaaactcggcaacgaagaagtcaaggaagcggtaaccaaggctatgagagaagagctg
aaaaaaatattcgacgcgaatcccgagctcgtgaaaacaattctttcaaagatcatgagc
accaaacaggcaagagaagcggcaaagagagctcgagaaatggtgagaaggaaaaacgtt
cttcaaaacacaacacttcccggaaaactggcagactgtagttccacacatagagagaaa
acggagcttttcatcgtggaaggtgactctgccgggggatcggcaaaacaggccagagac
agagaatttcaggctgttcttcccataagaggaaagattttgaacgtggaaaaatcatct
ctcgatagattactgaaaaacgagcagatcagtgacataattgttgcagtgggaacgggc
ataggagatgatttcgacgaaagcaagctcagatacggtaggattatcatcatgaccgac
gccgatatagacggtgcacacataagaactctccttctgacactcttctatagatacatg
agacccctcatcgaacagggcagggtatacatagcactcccacctctctacaggatcaaa
gctggaagagaagagttctacgtttacagtgaccaggagctggcggaatacaaagagaaa
ctccagggaaaaaggatcgaaattcaacggtacaaaggacttggcgagatgaatcctgag
cagctctgggaaacaacgatgaatccagaaacgagaaaaatcataagggtaactatagaa
gatgccgaagaagcggatagactctttgaaattctcatgggtaacgatccatccagtaga
agggagttcatagaaaggcacgctctgaaagtgaaagaactggatatctag
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