Thermotoga maritima MSB8: THMA_1481
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Entry
THMA_1481 CDS
T03902
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tmw
Thermotoga maritima MSB8
Pathway
tmw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
THMA_1481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmw03021
]
THMA_1481
Transcription machinery [BR:
tmw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THMA_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
SWIRM
Exonuc_VII_L
TFX_C
GCR1_C
DsrC
Motif
Other DBs
NCBI-ProteinID:
AKE29210
LinkDB
All DBs
Position
complement(1467965..1469188)
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AA seq
407 aa
AA seq
DB search
MAKKEKVTMNEEQQVLQEQHQEQTQEQTQEQKETLPPQIERRIKKLISLGKKKGYITYED
IDKAFPPDFEGFDTNLIERIHEELEKHGINIVENEPEEEEISASSDEQELEELLEKESPE
IHDSSNVRDSIKMYLKEIGKIPLLTPAQERELARRAQMGDKKAKEKLITSNLRLVVSIAK
RYMGRGLSFQDLIQEGNIGLLKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQARTIRI
PVHMVETINKLNRLRREYYQKHGEEPSIEELAKMMGKPPEKIKEILEAAKETISLESPIG
EDEDSSIEDFVADDSIASPKKEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKT
LEEVGQYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLSLMDENEG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaggaaaaggtcacaatgaacgaagaacagcaggttcttcaggaacagcac
caggagcagacgcaggagcagacacaggaacagaaggaaacacttcctcctcagatagag
aggcgtataaaaaagctcataagtttagggaaaaagaagggttacataacgtacgaggat
atagacaaggccttcccgccagatttcgaagggtttgacacgaacttgatagagagaata
catgaggaactggaaaagcatggaataaacatcgtggaaaatgaacctgaggaagaggaa
ataagcgcttccagtgatgaacaggaactcgaagaacttctggagaaagaatctcctgag
atacacgattcgagcaacgtaagggattctatcaagatgtatctcaaagagataggaaag
attcctctactcacacctgctcaggaacgtgaactcgcaagacgagcacagatgggcgat
aagaaggccaaagagaaactcataacatcgaatctgaggcttgttgtcagtatagccaag
cgttacatggggcgcggtctttctttccaggacctcatacaggaaggaaacataggactt
ctgaaggcggtagaaaagttcgactggagaaagggttacaaattcagcacgtacgctacc
tggtggatcagacaggcgatcacaagagcgatagcggatcaggcaaggaccatcaggata
cctgtccacatggtggaaactataaacaaattgaacagattgagaagagagtactatcag
aaacacggtgaagaaccatccatagaagaactcgcaaagatgatgggcaaacccccagaa
aagataaaggaaatactcgaagcagcgaaggaaaccatatccctggaatctcctataggt
gaagatgaggattcttctatcgaagactttgtggctgacgattccatagcctctccaaag
aaagaggccatgaggatgctcatgagagaagagctcgagaaagtcttgaaaactctgagc
ccaagagaagcgatggttctgagaatgaggtacggcttgctcgatggaaaaccaaaaacg
cttgaagaagttggccagtatttcaatgtcacaagagaaaggatcaggcagatagaggtc
aaagcactgcggaagttgagacatccatcgaggagcaagtacctgaaatcactgctctct
ctgatggatgaaaacgaagggtga
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