Thermotoga maritima MSB8: THMA_1502
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Entry
THMA_1502 CDS
T03902
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tmw
Thermotoga maritima MSB8
Pathway
tmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THMA_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmw03021
]
THMA_1502
03019 Messenger RNA biogenesis [BR:
tmw03019
]
THMA_1502
Transcription machinery [BR:
tmw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
THMA_1502
Messenger RNA biogenesis [BR:
tmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
THMA_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
DKNYY
AAA_22
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AKE29231
UniProt:
P38527
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1482326..1483609)
Genome browser
AA seq
427 aa
AA seq
DB search
MSEEQKTISISELESMNIKQLYEIAKSLGIPRYTSMRKRDLIFAILKAQTESTGYFFGEG
VLEIHPEGFGFLRRIEDNLLPSNDDIYISPSQIRKFNLNTGDIISGVIRKPKEGEKYFAM
IKIEAINYRPVEAVNDRVNFDNLTPDYPRERFILETDPKIYSTRLIDLFAPIGKGQRGMI
VAPPKAGKTTILKEIANGIAENHPDTIRIILLIDERPEEVTDIRESTNAIVIAAPFDMPP
DKQVKVAELTLEMAKRLVEFNYDVVILLDSLTRLARVYNIVVPPSGKLLTGGVDPAALYK
PKRFFGAARNTREGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELVLSRQLANKRIFP
AINLLLSGTRREELLLDEETLKKVWLLRRMLSAMTEEEGLTLILNKLSETSSNEEFLKLI
DKEKARY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaagaacagaaaaccattagtatatcagagctggaatctatgaacataaaacag
ctctatgagatagcgaagtccctgggtattcctcggtatacttctatgcgaaaaagagac
ttgatttttgccattttgaaagcccaaaccgaatccaccggttatttcttcggtgaaggt
gtgttggaaattcatcctgagggttttggatttctcaggaggatagaagacaaccttctt
ccgagcaacgacgatatatacatatccccttctcagataaggaagttcaacctgaacacg
ggagatataatttccggggttataagaaaaccgaaagaaggggaaaagtatttcgccatg
ataaaaatcgaagcgataaactaccgtccagtcgaagcggttaacgacagagtgaacttc
gacaacttaacaccggattatcccagagaacgcttcattcttgaaaccgacccgaagata
tattccaccagattgatagatctctttgcccccattggaaaaggccagagaggaatgata
gtggctcctccgaaagctggtaaaacgaccatcctcaaagaaatagcgaacggtatcgct
gaaaatcacccggataccataagaataatcttgctgatcgatgaaaggccggaagaagtt
acagatataagagagtcaacgaacgcaatcgtcatagcggctcccttcgacatgccacca
gacaaacaggtaaaggtcgccgagctcaccctggaaatggcaaagagactggtggaattc
aattacgatgttgttatacttcttgacagtctgacaagactcgctcgagtgtacaacata
gtagttcctcccagtgggaaacttctgacgggaggtgtggatccagccgcactttacaaa
cccaagagattttttggagcggcgagaaacacccgtgaaggtggaagcctcacgatcatc
gctactgctcttgtggaaacgggttcaaagatggacgaggtcatattcgaggaattcaaa
ggaacaggtaacatggaactggttctttcaagacagctggcgaacaagagaatcttccca
gccataaatcttttgctctctgggacaagaagagaagagctgttactcgacgaagaaact
ctcaagaaggtgtggctcttacgaagaatgctctctgcaatgacggaagaagagggcttg
acgctcatactgaacaaactttcggaaacatcgtcgaacgaagaatttctgaaattgata
gacaaggaaaaagcaagatactga
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