Thermotoga maritima MSB8: THMA_1660
Help
Entry
THMA_1660 CDS
T03902
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmw
Thermotoga maritima MSB8
Pathway
tmw03030
DNA replication
tmw03410
Base excision repair
tmw03420
Nucleotide excision repair
tmw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THMA_1660
03410 Base excision repair
THMA_1660
03420 Nucleotide excision repair
THMA_1660
03440 Homologous recombination
THMA_1660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmw03032
]
THMA_1660
03400 DNA repair and recombination proteins [BR:
tmw03400
]
THMA_1660
Enzymes [BR:
tmw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THMA_1660
DNA replication proteins [BR:
tmw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THMA_1660
DNA repair and recombination proteins [BR:
tmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THMA_1660
NER (nucleotide excision repair)
GGR (global genome repair) factors
THMA_1660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Ribosomal_L12
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKE29378
UniProt:
Q9X1V4
LinkDB
All DBs
Position
complement(1605714..1608395)
Genome browser
AA seq
893 aa
AA seq
DB search
MARLFLFDGTALAYRAYYALDRSLSTSTGIPTNATYGVARMLVRFIKDHIIVGKDYVAVA
FDKKAATFRHKLLETYKAQRPKTPDLLIQQLPYIKKLVEALGMKVLEVEGYEADDIIATL
AVKGLPLFDEIFIVTGDKDMLQLVNEKIKVWRIVKGISDLELYDAQKVKEKYGVEPQQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLEKYKDLEDILNHVRELPQKVRKALLRDRENAI
LSKKLAILETNVPIEINWEELRYQGYDREKLLPLLKELEFASIMKELQLYEESEPVGYRI
VKDLVEFEKLIEKLRESPSFAIDLETSSLDPFDCDIVGISVSFKPKEAYYIPLHHRNAQN
LDEKEVLKKLKEILEDPGAKIVGQNLKFDYKVLMVKGVEPVPPYFDTMIAAYLLEPNEKK
FNLDDLALKFLGYKMTSYQELMSFSFPLFGFSFADVPVEKAANYSCEDADITYRLYKTLS
LKLHEADLENVFYKIEMPLVNVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEEIYRIA
GEPFNINSPKQVSRILFEKLGIKPRGKTTKTGDYSTRIEVLEELAGEHEIIPLILEYRKI
QKLKSTYIDALPKMVNPKTGRIHASFNQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPNWWIVSADYSQIELRILAHLSGDENLLRAFEEGIDVHTLTASRIFNVKPEEVTEE
MRRAGKMVNFSIIYGVTPYGLSVRLGVPVKEAEKMIVNYFVLYPKVRDYIQRVVSEAKEK
GYVRTLFGRKRDIPQLMARDRNTQAEGERIAINTPIQGTAADIIKLAMIEIDRELKERKM
RSKMIIQVHDELVFEVPNEEKDALVELVKDRMTNVVKLSVPLEVDVTIGKTWS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgagactatttctctttgatggaactgctctggcctacagagcgtactatgcgctc
gatagatcgctttctacttccaccggcattcccacaaacgccacatacggtgtggcgagg
atgctggtgagattcatcaaagaccatatcattgtcggaaaagactacgttgctgtggct
ttcgacaaaaaagctgccaccttcagacacaagctcctcgagacttacaaggctcaaaga
ccaaagactccggatctcctgattcagcagcttccgtacataaagaagctggtcgaagcc
cttggaatgaaagtgctggaggtagaaggatacgaagcggacgatataattgccactctg
gctgtgaaggggcttccgctttttgatgaaatattcatagtgaccggagataaagacatg
cttcagcttgtgaacgaaaagatcaaggtgtggcgaatcgtaaaagggatatccgatctg
gaactttacgatgcgcagaaggtgaaggaaaaatacggtgttgaaccccagcagatcccg
gatcttctggctctaaccggagatgaaatagacaacatccccggtgtaactgggataggt
gaaaagactgctgttcagcttctagagaagtacaaagacctcgaagacatactgaatcat
gttcgcgaacttcctcaaaaggtgagaaaagccctgcttcgagacagagaaaacgccatt
ctcagcaaaaagctggcgattctggaaacaaacgttcccattgaaataaactgggaagaa
cttcgctaccagggctacgacagagagaaactcttaccacttttgaaagaactggaattc
gcatccatcatgaaggaacttcaactgtacgaagagtccgaacccgttggatacagaata
gtgaaagacctagtggaatttgaaaaactcatagagaaactgagagaatccccttcgttc
gccatagatcttgagacgtcttccctcgatcctttcgactgcgacattgtcggtatctct
gtgtctttcaaaccaaaggaagcgtactacataccactccatcatagaaacgcccagaac
ctggacgaaaaagaggttctgaaaaagctcaaagaaattctggaggaccccggagcaaag
atcgttggtcagaatttgaaattcgattacaaggtgttgatggtgaagggtgttgaacct
gttcctccttacttcgacacgatgatagcggcttaccttcttgagccgaacgaaaagaag
ttcaatctggacgatctcgcattgaaatttcttggatacaaaatgacatcttaccaagag
ctcatgtccttctcttttccgctgtttggtttcagttttgccgatgttcctgtagaaaaa
gcagcgaactactcctgtgaagatgcagacatcacctacagactttacaagaccctgagc
ttaaaactccacgaggcagatctggaaaacgtgttctacaagatagaaatgccccttgtg
aacgtgcttgcacggatggaactgaacggtgtgtatgtggacacagagttcctgaagaaa
ctctcagaagagtacggaaaaaaactcgaagaactggcagaggaaatatacaggatagct
ggagagccgttcaacataaactcaccgaagcaggtttcaaggatcctttttgaaaaactc
ggcataaaaccacgtggtaaaacgacgaaaacgggagactattcaacacgcatagaagtc
ctcgaggaacttgccggtgaacacgaaatcattcctctgattcttgaatacagaaagata
cagaaattgaaatcaacctacatagacgctcttcccaagatggtcaacccaaagaccgga
aggattcatgcttctttcaatcaaacggggactgccactggaagacttagcagcagcgat
cccaatcttcagaacctcccgacgaaaagtgaagagggaaaagaaatcaggaaagcgata
gttcctcaggatccaaactggtggatcgtcagtgccgactactcccaaatagaactgagg
atcctcgcccatctcagtggtgatgagaatcttttgagggcattcgaagagggcatcgac
gtccacactctaacagcttccagaatattcaacgtgaaacccgaagaagtaaccgaagaa
atgcgccgcgctggtaaaatggttaatttttccatcatatacggtgtaacaccttacggt
ctgtctgtgaggcttggagtacctgtgaaagaagcagaaaagatgatcgtcaactacttc
gtcctctacccaaaggtgcgcgattacattcagagggtcgtatcggaagcgaaagaaaaa
ggctatgttagaacgctgtttggaagaaaaagagacataccacagctcatggcccgggac
aggaacacacaggctgaaggagaacgaattgccataaacactcccatacagggtacagca
gcggatataataaagctggctatgatagaaatagacagggaactgaaagaaagaaaaatg
agatcgaagatgatcatacaggtccacgacgaactggtttttgaagtgcccaatgaggaa
aaggacgcgctcgtcgagctggtgaaagacagaatgacgaatgtggtaaagctttcagtg
ccgctcgaagtggatgtaaccatcggcaaaacatggtcgtga
DBGET
integrated database retrieval system
