Thermotoga maritima Tma200: THMC_0439
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Entry
THMC_0439 CDS
T03901
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tmx
Thermotoga maritima Tma200
Pathway
tmx00040
Pentose and glucuronate interconversions
tmx01100
Metabolic pathways
tmx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
THMC_0439
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THMC_0439
Enzymes [BR:
tmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
THMC_0439
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AKE26363
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Position
453883..454980
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AA seq
365 aa
AA seq
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MRFSRVVSLVLLLVFTAVLTGAVKASLNDKPVGFASVPTADLPEGTVGGLGGEIVFVRTA
EELEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGINDAKIVGGGLVIKDAQNVII
RNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHCTFVNGNDGAVDIKKYSNYITVSW
CKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNCIQRMPRIRFGMAHVFNNFYSM
GLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTL
GEGDAKNEFYYCKEPEVRPVEEGKPALDPREYYDYTLDPVQDVPKIVVDGAGAGKLVFEE
LNTAQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttctcgtgtggtttctttagtactgcttcttgttttcacagctgttctaact
ggtgctgtaaaagcttctctcaatgacaaacctgtgggatttgcatccgtaccgacggcg
gatttaccggagggcacagttggtggattgggtggtgagatcgttttcgtcagaacagcg
gaagaactggagaaatacacaacagcagaaggaaagtacgtaatagtcgttgatggaacg
atcgtttttgaaccaaagagagaaattaaagttctttcagacaaaacgatcgtgggaata
aacgatgcaaagatagtcggtggaggtcttgtgataaaggatgcccagaatgtgatcata
agaaatattcattttgagggcttttacatggaggacgatcctcggggtaagaagtatgat
ttcgactatatcaacgtggaaaattctcatcatatctggatcgaccactgtaccttcgtc
aacggcaacgatggtgcagtggatattaaaaaatactcaaactacatcactgtttcctgg
tgtaaatttgtggatcacgacaaggtctccctcgttggttcctccgacaaagaagatccg
gaacaggcagggcaggcttacaaggtcacgtaccaccataactacttcaagaactgtatt
cagagaatgcccagaattagatttggaatggcacacgtgttcaataacttctacagcatg
ggcctgagaacaggtgtctctggaaacgtcttccccatttacggtgttgcttcagcgatg
ggagcgaaagtccacgttgaaggaaactacttcatgggatacggtgctgtgatggcagag
gcgggaattgcgttccttcccaccagaatcatgggtcccgtggaaggttatctgacgctc
ggtgaaggagatgcaaagaatgaattttactactgtaaagaacctgaagtgcgtcctgtt
gaggaaggaaaacccgctctcgatccacgcgagtactacgattacacgcttgatccagtt
caagatgttccaaaaatcgttgtagatggagcaggagcagggaaactggtgtttgaagaa
ctaaatacggctcagtaa
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