Thermotoga maritima Tma200: THMC_1504
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Entry
THMC_1504 CDS
T03901
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmx
Thermotoga maritima Tma200
Pathway
tmx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THMC_1504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmx03021
]
THMC_1504
03400 DNA repair and recombination proteins [BR:
tmx03400
]
THMC_1504
Enzymes [BR:
tmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THMC_1504
Transcription machinery [BR:
tmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THMC_1504
DNA repair and recombination proteins [BR:
tmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THMC_1504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AKE27361
LinkDB
All DBs
Position
complement(1474035..1475045)
Genome browser
AA seq
336 aa
AA seq
DB search
MIEFVIPKKLKVEEEREERDYYYSRFSLSPLERGYAITIGNALRRVLLSSIPSLAIVGVR
FIKPEKYHEYDYIEGVKEDILDIILNLKKVQFRINVTVKGTIKMEVEKKGPGELVAGDIK
TPAGIEVVNPDLHIATLNSKADLFFEVYAEVGKGFVPVSEREERPDVGWIPIDGVFSPVI
KVNFLTENVRVGKRTDYDKLILEIWTKKSIRPEEALRKAADILINHFKIVTEGLPELKIS
EEYIITSEEEEAEVPASEHEEEHRENSDVYNRKIDELELSVRSLNCLKRAKIETIGDLLS
KTEEELLKIKNFGQKSLDEVKEKLKEKFGLELRKGE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatttgtgataccaaaaaaattgaaggtggaggaagagcgggaagaaagagat
tattactactcgagattttcgctttctccgcttgaaagaggatatgccatcacgatagga
aacgcattaaggagagttcttctctcctccataccttctctcgcaatcgttggagtgaga
ttcataaagccagaaaagtaccatgaatacgattacattgaaggagtaaaagaagacata
ctggatataatcctgaacttgaagaaagttcaatttcggatcaacgtgactgtgaaaggt
acaataaagatggaagtggagaagaaaggaccgggtgaactcgtcgcgggtgatataaag
acaccggctggtatcgaagtagtgaatccggatctgcacatcgccaccctgaattctaaa
gcagatcttttcttcgaagtctacgcagaagtgggaaaaggatttgttcctgtgtctgag
agggaagaaagacctgacgtgggatggataccaatagatggagttttcagtcctgtgatc
aaagtgaactttctgacagaaaacgttcgtgttggaaaaaggacggattacgacaagctc
attcttgaaatctggacgaagaaatcgataagacctgaagaggccctcagaaaggctgcg
gacatcctgataaatcatttcaaaatcgtgacggaagggttgcctgaactgaagatctcc
gaggaatacatcatcacatccgaggaggaagaagcagaagtccctgccagtgaacacgaa
gaggaacacagggaaaactcagatgtgtacaacagaaagatagatgaactcgaactttca
gtcagatctctcaactgtttgaagagagccaaaatagaaacgatcggggatcttctcagc
aaaaccgaggaagagcttttgaagataaagaattttggtcagaaatctctcgatgaggtc
aaggagaaactgaaagaaaaattcggtcttgagctcaggaagggggaatga
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