Terrisporobacter mayombei: TEMA_17760
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Entry
TEMA_17760 CDS
T09390
Symbol
rnjA_1
Name
(GenBank) Ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tmy
Terrisporobacter mayombei
Pathway
tmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TEMA_17760 (rnjA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmy03019
]
TEMA_17760 (rnjA_1)
Messenger RNA biogenesis [BR:
tmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TEMA_17760 (rnjA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF7600
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
WMT81436
UniProt:
A0ABY9Q1F6
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All DBs
Position
complement(1674886..1676562)
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AA seq
558 aa
AA seq
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MQLFKKNTNKVKVMALGGLNEIGKNMTVIEYKDEIVVIDAGLSFPEDEMLGVDIVIPDIT
YLLKNKDKVKGIFITHGHEDHIGALPYILKKIDVPVYGTRLSIGLIEVKLKEHKLNNVKL
NVVTPKQIIKLKNISVEFIKNNHSIPGSCSLAVHTEQGVIFHTGDFKIDLTPIDGDVMDI
HRICELGSAGVLLMLADSTNVEKPGFTMSERTVGAGLDDLFRKANGSRIIVSTFASNIHR
LQQIINTAVKFNRKVAVSGRSMVNVIGVAKELGYLEMEDDTLVDLNDISKYDDNELVIIT
TGTQGEPMSALARMSSSEHKKVEIKKGDLVIISAHPIPGNEKLISKVINLLFERGARVVY
NDIADIHVSGHAAQEDLKLINRMVKPKFFMPVHGEYRMLKRHAELANELGMPDQNVFVMQ
TGQVLELDRHSAKVTATVPTGNVLVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKED
GKVLAGPDIISRGFVYVRESEDLMDGAKNVIKDVLTECEEKNIKEWAYLKNNIKENLKEY
LYIKTKRNPMILPIIMEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtttaagaaaaacaccaacaaggttaaagtaatggctttaggtggtcttaac
gagataggcaaaaatatgaccgtaatagagtataaggatgagattgttgtaatagatgcg
ggtttaagttttccagaagatgaaatgttaggtgttgatatagttatacctgatataact
tatttattaaaaaataaggataaggtaaaaggtatattcataacacatggacatgaggat
catataggagctcttccatatatacttaaaaaaatcgatgtacctgtgtacggaactaga
cttagtattgggctaattgaagttaaattaaaagaacataaacttaataatgtaaaatta
aatgttgttactcctaaacaaataattaagcttaaaaatattagtgtagaatttataaaa
aataaccacagtataccaggatcttgttcgctggctgtacacacagagcaaggggttatt
ttccatacaggagactttaagattgatcttacaccgatagatggagatgttatggatatt
cacagaatatgtgagcttggaagtgcgggagttcttttaatgttagcagatagtacaaac
gtggaaaaaccaggatttactatgtctgaaagaacagtaggagcaggtcttgatgattta
tttagaaaagcaaatggtagtagaattatagtatctacttttgcatcaaatattcataga
ttacaacaaataataaatacggcggttaaatttaatagaaaagttgctgtctcaggaaga
tcaatggttaatgtaataggtgttgctaaagaacttggctatttagagatggaagacgat
acattagttgacttaaatgacatatctaaatatgatgacaatgaattagtaattataact
acaggaacacagggagaaccaatgtcggctcttgctagaatgtcaagtagcgaacacaaa
aaagtagaaattaaaaagggagatctagtaataatttcagctcatccaataccaggaaat
gaaaagctaatctcgaaagtgataaatcttttatttgaaagaggagcgagagtcgtttac
aacgatatagctgatatacacgtatcaggtcatgcagctcaagaagatttaaaacttata
aatagaatggttaagccaaaattctttatgccagttcatggagaatatagaatgttaaaa
cgtcatgcagaattagctaatgagcttggtatgccagatcaaaatgtatttgtaatgcaa
actggtcaagttttagaactagatagacattctgcaaaagttactgctacagtaccgaca
ggaaatgtacttgtcgatggacttggagtaggagatgtaggaaacatagttctaagagat
agaaaacatttatctgaagatggacttatgatagtagttgttactatatctaaagaagat
ggtaaagtacttgctgggccagacattatatctagaggatttgtttatgttagggaatca
gaagatttaatggatggagctaagaatgtaataaaagatgttttaactgaatgtgaagaa
aagaatataaaagaatgggcatatttaaaaaataatattaaagaaaacttaaaggaatat
ttatatataaaaactaagagaaatccaatgatattaccaataatcatggaagtataa
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