Terrisporobacter mayombei: TEMA_17950
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Entry
TEMA_17950 CDS
T09390
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmy
Terrisporobacter mayombei
Brite
KEGG Orthology (KO) [BR:
tmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmy03032
]
TEMA_17950 (topA)
03400 DNA repair and recombination proteins [BR:
tmy03400
]
TEMA_17950 (topA)
Enzymes [BR:
tmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TEMA_17950 (topA)
DNA replication proteins [BR:
tmy03032
]
Prokaryotic type
DNA Topoisomerases
TEMA_17950 (topA)
DNA repair and recombination proteins [BR:
tmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TEMA_17950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WMT81454
LinkDB
All DBs
Position
complement(1694488..1696566)
Genome browser
AA seq
692 aa
AA seq
DB search
MAKTLVIVESPAKAKTIEKFLGKSHYTVKASVGHVRDLPKSTLGVDIDNDFEPRYINIRG
KGDLIKELKKEAKKSKKVYLATDPDREGEAISWHLSYILGIDENDECRIEFNEITKDAIK
KAIKSPRNIDLKLVDAQQARRVLDRLLGYQISPILWAKVRKGLSAGRVQSVTTKLICEKE
REINEFVPKEYWNLEIEGKTQDGEIVLFKFVSFNNEKIDLNNEEEVNKILDDIKNGKLIV
EKIESKTRRKSAPKPFTTSALQQDGANKLSFTTKKTMIIAQELYEGVDIEGEGTVGLISY
IRTDSKRISEEAKEKSKSYILEELGENYYKVNTDKKENNKEKKKVQDAHEAIRPTSVLRT
PNSVKSSLSKDQFKLYNLIWRRFVASQMEDSVFDVLNVDCKIGNALFRATGSVMKFDGYT
KIYNFTEREDKILPPIKESDELEVNQFMPSQHFTQPPARFTEASLVKTLEELGIGRPSTY
APTITTILNRGYVEKQGTSLHPTELGMIVTDILNINFQKFIDVDFTVQMESKLDEIEEGD
IKWKSVVGEFYEPLKEAIEEANEKIEKINMDEETDEICELCGSNMVIKYGRFGKFMACKN
YPDCKNTKPLVNKVGVKCPKCKEGEIILRKSKKGKAFYGCSNYPECDFISWYKPTGEVCK
ECGSYMIEKQTKSETKEVCSNKECKAEGRILE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacattggtaattgtggaatcgcctgcaaaagctaaaaccatagaaaaattc
ttaggaaaaagccattatacagtaaaggcttcagttggtcatgttagagatttacctaaa
agtactttaggtgttgatatagataacgattttgaaccaagatatattaatatcagaggt
aaaggtgatttaataaaagaattaaaaaaagaagctaaaaaatctaagaaagtatatctg
gcaactgaccccgatagagaaggagaggcaatctcttggcatttatcatatatacttggc
attgacgaaaatgatgaatgtagaatagaatttaatgagataacaaaagatgctattaaa
aaagctataaaaagtcctaggaacatagatttaaaacttgtagatgctcaacaagcaaga
agggtattagatagacttttaggatatcaaataagtcctattctttgggcaaaagtaaga
aaaggccttagtgcaggtagggtacaatcagtaacaacaaaattaatatgtgaaaaagaa
agagaaattaatgaatttgtacctaaagaatattggaatttagaaattgaaggaaaaact
caagatggagaaattgtattatttaaatttgtatcatttaataatgaaaaaatagattta
aataatgaagaagaagtaaataaaattttagatgatataaaaaatggaaaattaatagta
gaaaaaattgaatcaaaaacaagaagaaagtctgctccaaaaccatttacaactagtgcg
cttcaacaagatggagctaataaattatcttttacaactaaaaagacaatgataatagcg
caagaattatatgaaggtgtggatattgaaggagaaggaacagtaggtcttatatcatac
ataagaacagattcaaagagaatatccgaagaggctaaggaaaagtcaaagtcatatatc
ttagaagaattaggagaaaactactataaagtaaatactgataaaaaagaaaataataaa
gaaaagaaaaaagtacaagatgcccatgaagctattagaccaacctcagtgcttagaaca
ccaaatagtgtaaaaagttcattaagtaaagatcaatttaagctttacaatttgatttgg
agaagatttgtagctagtcagatggaagactctgtattcgatgtactaaatgtagattgc
aaaataggcaatgcattatttagagcgacgggttcagtaatgaaatttgatggatacact
aagatttataattttacagaaagagaagataaaattttacctccaataaaagaaagcgat
gagttagaagttaatcaatttatgccttctcaacactttactcagccaccagcaagattt
actgaggctagtttagttaaaactttagaagaacttggtataggtagacctagtacttat
gctcctacaataacgactatcctaaatagaggttatgttgaaaaacaagggactagttta
catccaacggaattaggcatgatagtaacggacattttaaatataaacttccaaaaattt
attgatgttgactttactgttcagatggaaagtaaattagatgaaatagaagaaggcgat
atcaagtggaagagtgttgttggtgagttctatgagcctttaaaggaagctatagaagaa
gctaacgaaaaaatagaaaaaattaatatggatgaagaaactgatgaaatatgtgaacta
tgtggttcaaacatggttattaaatacggtagatttggcaaatttatggcatgtaaaaat
tatccggattgtaaaaacacaaagccattggttaataaggtaggagtaaaatgtcctaag
tgtaaagaaggagagattattcttagaaaatctaaaaaaggtaaggctttttatggatgc
tcaaattatccagagtgtgatttcataagttggtacaaacctacaggagaagtttgcaaa
gaatgtggttcttacatgatagaaaaacaaacaaaaagtgagacaaaagaggtatgttct
aataaagaatgtaaggctgaaggaagaattttagaataa
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