Terrisporobacter mayombei: TEMA_20130
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Entry
TEMA_20130 CDS
T09390
Symbol
dinG_3
Name
(GenBank) 3'-5' exonuclease DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tmy
Terrisporobacter mayombei
Pathway
tmy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TEMA_20130 (dinG_3)
09124 Replication and repair
03420 Nucleotide excision repair
TEMA_20130 (dinG_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmy03021
]
TEMA_20130 (dinG_3)
03036 Chromosome and associated proteins [BR:
tmy03036
]
TEMA_20130 (dinG_3)
03400 DNA repair and recombination proteins [BR:
tmy03400
]
TEMA_20130 (dinG_3)
Enzymes [BR:
tmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TEMA_20130 (dinG_3)
Transcription machinery [BR:
tmy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TEMA_20130 (dinG_3)
Chromosome and associated proteins [BR:
tmy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TEMA_20130 (dinG_3)
DNA repair and recombination proteins [BR:
tmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TEMA_20130 (dinG_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PhoH
Helicase_C
ResIII
DUF1542
DbpA
Motif
Other DBs
NCBI-ProteinID:
WMT81668
LinkDB
All DBs
Position
complement(1921549..1923882)
Genome browser
AA seq
777 aa
AA seq
DB search
MKKIKISVRNLVEFIMKKGSIDNRFVGNIKAIEGIRGHQKVQKSYGGEYTSEVSIKHTFT
FDEVEIEVEGRMDGLLIENSKVIIDEIKTTTKDLLLIDEDSNPLHWAQVKCYGYMYCIHN
DLHKIDLQVTYYNIENKSTRILRKKFQLSELEEFFFKLVNEYKLWANMEKQWMEIRNDSI
KKLKFPFERYRSGQREFAVRVYKSIVDSRKCFAMAPTGTGKTISTLFPAIKAMGEEKTSK
IFYLTAKTITREVVNETIRLMKKQNLNLRSVTITAKEKICKMEEVNCNPDYCPYANGYYD
KINNALKQILSKYNDFSRKNIDEISEAYKLCPFELCLDLTMFSDVIICDYNYIFDPRVYL
KRYFDVKKTDFIFLVDEAHNLLDRSRNMYSAEINQQIFIKMKKIIGKKDKRILNTIKEIE
KYFTDKSKVLNLIKEKHIIEEELPKSLIELFNILMKFMDEYLSRTNEENSELLDLYFEVN
KFLSISTFYNDNYRTIYSDELIGINVKLFCANPSDLIIEKMNKSKSTTIFSATLTPLSYY
KDIYGSEDGDFVINLKSPFDVKNRLIMIGEDISTKYNKREDTVEDLVEYIKVCVESKIGN
YMVFFPSYKYMELAYEKIRDKYEELNVIIQENNMSEEEKEEFLNLFNDNKETHVGFCVLG
GHFSEGIDLTEDKLIGVIVVGVGMPQINIERDIIKDQLNENNKGFDYAYVYPGMTKVLQA
VGRCIRTSNDRGVILLLDNRYSSYRYKSLFPQEWNPYVRIKKPNDIKNLCKRFWDNE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataaaaatatcagtgagaaacttagttgagtttattatgaaaaaaggaagt
atagacaacagatttgtaggaaatataaaggcaattgaaggaatcagaggccatcaaaaa
gtacaaaaatcctatggaggtgaatatacttcggaagtatctataaaacatacatttact
tttgatgaagtagaaatagaagttgaaggaaggatggatgggctattaattgaaaatagt
aaagttataattgatgaaataaaaactactacaaaagatttactattaatagatgaagat
agcaatccgcttcattgggctcaggtaaaatgctatggatatatgtattgtatccataat
gatttacataaaatagatttacaagtaacttattataatatagaaaataaatctacaaga
atattaagaaaaaagttccaactaagtgaattggaagagtttttctttaagttggttaat
gaatataaactatgggcaaatatggagaaacaatggatggaaataagaaatgactccatt
aaaaaattgaagtttccatttgaaagatataggtcaggacaacgagaatttgcagtgaga
gtttataaaagtatagtagatagcagaaaatgttttgccatggcaccaacaggtactgga
aaaactatatcaacactttttccagctataaaagcaatgggagaagagaaaacttcaaaa
attttttaccttacagcaaaaactataacgcgagaagtagtaaatgagactataagattg
atgaaaaaacaaaatttaaatttgagaagtgtaacaataactgcaaaagaaaaaatatgt
aagatggaagaggttaattgtaatccagattattgtccttacgccaatggatactatgac
aaaataaacaatgcccttaagcaaattttaagtaaatataatgattttagtagaaaaaat
attgatgaaataagtgaagcttataaattatgtccctttgaattatgccttgatttaacc
atgtttagtgatgtaattatttgtgattataattacatatttgatccgagggtttactta
aaaagatattttgatgtaaaaaaaacagattttatatttcttgtggacgaggcacacaat
ttattagatagaagtagaaatatgtattctgctgaaataaatcaacaaatttttataaaa
atgaagaaaataataggcaaaaaagataaaagaatattaaatacaataaaagaaatagaa
aaatattttacagataaatcaaaagtattaaatttaataaaagagaagcatattattgaa
gaggaattacctaaatcgcttatagagctatttaatattttaatgaaatttatggatgaa
tatttatcaagaactaatgaagaaaactccgaactactagatttgtattttgaagttaat
aaatttttatctatttcaacgttctataatgataactatagaactatatatagtgatgaa
ttaataggtattaatgtaaaattattttgtgcaaatccttcagacttaattattgagaaa
atgaataaatctaaatctacaacaattttttctgccacgttaacacctttaagctattat
aaagatatttacggtagtgaggatggagactttgtaataaatttaaagagtccttttgac
gtaaaaaacagattgataatgataggagaagatatttccactaaatataataaaagagaa
gatacagtagaagatttagtagaatatattaaagtttgtgtagaaagcaaaattggtaat
tatatggtatttttcccgtcatataaatatatggaattggcttatgaaaaaattagagat
aagtatgaagaacttaatgtaatcatacaagaaaataatatgagcgaggaagaaaaagaa
gaattcttaaatttatttaatgataataaagaaactcatgtgggattttgtgtcctggga
ggtcatttttcagagggtatagatttaacagaagataagctaataggcgttattgttgtg
ggagttggaatgccacaaataaacatagaaagagatataataaaggaccagttaaatgag
aataataaaggatttgattatgcttatgtttatccaggaatgacaaaagtacttcaggct
gtggggagatgtattaggacttcaaatgatagaggggtaattttacttctagacaataga
tattcaagttatagatacaaaagtctttttccgcaagaatggaatccttatgtgaggata
aaaaaacctaatgatattaagaatttatgcaaaagattttgggataatgagtaa
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