Terrisporobacter mayombei: TEMA_24020
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Entry
TEMA_24020 CDS
T09390
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tmy
Terrisporobacter mayombei
Brite
KEGG Orthology (KO) [BR:
tmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmy03400
]
TEMA_24020 (addB)
Enzymes [BR:
tmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TEMA_24020 (addB)
DNA repair and recombination proteins [BR:
tmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TEMA_24020 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
NOG1_N
Motif
Other DBs
NCBI-ProteinID:
WMT82049
LinkDB
All DBs
Position
complement(2330699..2334160)
Genome browser
AA seq
1153 aa
AA seq
DB search
MGLRFVLGRGGIGKTTFMLNEIKKRVQDNETSPVILLVPEQYSFEMEKNMSKLFQGEEKD
KYLRSRVLSFKTMSSIVFSKVGGLTDVNINSSGKAMIIYKSIDKISNELKVYGRSSTQSG
FVGSITDMISELKQYNVSPDALENIAGEIENETLRYKLMDIAKIYGEFEKNLHENYVDSQ
DLLTSLSSKLQQCDYFKDAYIYIDEFTGFTPNQYSILKELLKQAKEVYISLTIDSLTQFT
YSKNDAFSRTKYTYEKLYKIAAEESVKIHTNINLNAENVKRFNGNEELQHLEAFYHAYPY
RKYEKETKHVRIKEFNNLYDEVEQVAKDIVHLVRDKKARYKDITVATRDLNRYDFLVRSI
FKEYEIPNFIDSKREAKSNPIIVLILSALEMRNRRYSYETMFRYLKSGLIGVSDEDISLL
ENYVLQNGITGKKWFEEKWEYKVNQNYLAEESEFDLEQKERINETRNQILEPIIKLQNKL
DKKNKTVREICTYVYEFLLDINIEETLESLINNFNEKGDLEIAKEYSQVWQIVVDILDQM
VELMGDEKISLDKFMKVISLGFDEYELGLVPPSMDQVLVSSVDRMKNSNTKHLYLIGTTD
GIFPLISKESGLLSDKDRNSLGEKGIEVDIDSKTKTYEEQFLVYKALTYTSENLTISYPI
SDHEGKTLRPSIIVSRLKKIFPNINTKSYVLKDLDNSTDTALDNITVKAPTFNELINAIK
EFEIRGDINEVYLDLYRYFLGDEEYKNKLEKVVRGLSYTNQVEKVEREKIKQLYENKNLS
ISKLERYAQCPFSYFIQYGLKAQERKEYSFTAPDLGSFIHNILDIFSKSLNKDKLNWHEI
DEDYIRSRVSLIVDEMVSKIPGFILNSSERYKYLAYRLKKMLVSAISIISMQIKQGNFEP
VDYEVSFRKNGKYPPIKLVLNDGQEVTLVGQIDRIDELEKGDSKYIRIIDYKSGDKSINL
TEVYYGLQLQLLVYLDAIIDSDRHKKSNLKPAAILYNRVDNPIVRSNEDQKDAVINEEIL
KKLRMNGLVLKDVDIIGEMDMSLKEGERKTSLVIPANFDKNGNIGRYTKGVTEPEFDILR
EYVKYEVKDLCERMVEGDISIIPCKNKNGTSCDFCTYSSICQFDPSIKGNMYTILNDKSD
EEVIKLMEKEVKK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttagatttgtattaggtagaggtggaataggaaaaacaacctttatgctaaat
gaaataaaaaaaagagtgcaagacaatgaaactagtcctgtaattcttttagttccagag
caatactcatttgagatggaaaaaaatatgtctaaacttttccaaggagaagaaaaggac
aaatatttaagaagtagagtgctaagttttaaaaccatgagtagtatagtattttcaaaa
gtaggtggacttactgatgtaaatattaactctagtggtaaggctatgattatatataaa
tccatagataaaattagtaatgagctaaaagtatatggaagatcttctacacaatctggt
tttgtaggatccataacagatatgatatcagaattaaaacaatacaatgtatcaccagat
gctttagaaaatatagcaggagaaatagaaaatgaaactttaagatataaattaatggat
attgctaagatctatggagaatttgaaaaaaatctacatgaaaattacgtggattctcaa
gatctattaacatccttaagttcaaaattacaacaatgtgattattttaaagatgcttac
atttatatagatgaatttactggctttacaccaaatcagtacagtattttaaaagaatta
ttaaaacaagctaaagaagtttatatttccttaactatagattctttaactcaatttaca
tattcaaaaaatgatgctttctcaagaactaaatatacttatgaaaagttatataaaatt
gcagcagaagaaagtgtaaaaattcatacaaatataaatttaaatgcagaaaatgtaaaa
agatttaatggaaatgaagaattacaacatttagaagctttttatcatgcatatccttat
agaaaatatgaaaaagaaacgaaacatgtaagaattaaagagtttaataatttatatgat
gaagtagagcaagtggcaaaggatattgttcatttagttagagataaaaaagcaagatat
aaagatataactgtggctactagagatttaaatagatatgattttttagtgcgctcaatt
tttaaagaatatgaaattcccaactttatagactcaaaaagagaggcaaagagtaatcct
attatagtattaattctttctgcattagaaatgagaaacagaagatattcttatgagact
atgtttagatatttaaagagtggtcttataggtgtaagtgatgaagatataagcttactt
gaaaattatgtacttcaaaacggaattacaggcaaaaagtggtttgaagaaaaatgggag
tataaagttaatcaaaattatttggcagaagaaagtgaatttgatttggaacaaaaagag
agaatcaatgaaactagaaatcaaatattagaaccaattataaaattacaaaataaactt
gataagaaaaataaaactgtaagagaaatctgtacttatgtgtatgagtttttattggat
attaatatagaagaaactttagaatctttaattaataatttcaatgaaaaaggcgacctg
gaaattgctaaggaatactcacaagtttggcaaatagtagtggatatacttgaccaaatg
gtagagttaatgggtgatgaaaaaatatctttagataaatttatgaaggtgataagtctt
ggatttgatgaatatgagctaggtcttgtacctccaagcatggaccaagttttagtaagt
tctgtagacagaatgaaaaactccaacacaaagcacctttatttaataggaactactgat
ggtatattcccactaatatcaaaagaaagtggacttttaagtgataaagacagaaattct
ttaggtgaaaaaggaatagaagttgatatagatagtaagacaaaaacttatgaagagcaa
tttttagtttacaaggcattaacttatacaagtgaaaacttaacaataagttatcccata
tcagatcatgaaggaaagacattaaggccttcaataattgtatctagacttaaaaaaata
ttccctaatattaacacaaaaagttatgtactaaaagatttggataactctacagataca
gctttagacaatataacagtaaaagcacctactttcaatgagttaataaatgctattaag
gaatttgaaattagaggggatatcaacgaagtttatttagatttatatagatatttccta
ggtgatgaagaatataagaataagttggagaaagtagtaagggggttaagctatactaac
caagttgaaaaagtagaaagagaaaaaattaaacaattatatgaaaataaaaacttaagt
atttccaagctagaaagatatgctcagtgtccattctcatattttattcaatatggacta
aaagcacaggaaagaaaagagtattctttcacagcaccagatttaggttcatttatacat
aatatacttgatattttctctaaatctttaaacaaagacaaattaaactggcatgaaata
gatgaagattatattagaagtagagtatctcttattgtagatgaaatggtaagcaaaata
ccaggatttattttaaattcttctgaaagatacaagtatttggcatatagattgaaaaaa
atgctagtttctgcaattagtattatttccatgcaaataaaacaaggaaactttgaacct
gttgactacgaagttagctttagaaaaaatgggaaatatccaccgataaaattagtatta
aatgatggtcaagaagtaactttagtcggtcaaatagatagaatagatgaattggagaaa
ggcgacagcaagtatatccgtattatagactataaatcaggagataaatccatcaactta
acagaagtttattatggcttacaattacagttattagtttatttagatgcaattatagac
agtgatagacataaaaaatcaaacttaaaaccagcagctatactttacaacagagttgat
aaccctattgtaagaagcaatgaagatcaaaaagatgctgtaataaatgaagaaatatta
aagaaacttagaatgaacggattagtattaaaagatgttgacataatcggagaaatggat
atgtcccttaaagaaggagaaagaaaaacatctttagttataccagctaactttgacaaa
aatggaaatataggcagatatactaaaggagttacagagccagagtttgatatattaaga
gaatatgtaaaatacgaagtaaaagatctttgtgaaagaatggtagaaggagatataagt
ataattccatgtaaaaataaaaatgggacatcttgtgatttttgtacttactcatcaatc
tgccagtttgatccttcaataaaaggaaacatgtatacaatccttaatgataaaagtgat
gaagaagtaataaaactaatggagaaggaggttaagaaatag
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