Thauera aminoaromatica: Tmz1t_0338
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Entry
Tmz1t_0338 CDS
T00804
Name
(GenBank) sigma-70 region 2 domain protein
KO
K03086
RNA polymerase primary sigma factor
Organism
tmz
Thauera aminoaromatica
Pathway
tmz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tmz1t_0338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmz03021
]
Tmz1t_0338
Transcription machinery [BR:
tmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmz1t_0338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Ank_2
Ank
Ank_4
Sigma70_r1_2
Ank_5
Ank_3
FHBP_N
Motif
Other DBs
NCBI-ProteinID:
ACK53125
UniProt:
C4ZMT1
LinkDB
All DBs
Position
complement(382911..384683)
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AA seq
590 aa
AA seq
DB search
MNDPAPFRKKPLNPLLKMAAVAGVQTAIRLHIRRGDDLDAVEENGRTPLMLAAVRGHADV
CKLLLDAGADPLLTDHEGRDAVGLALAAGKTGVVEVLMQFRVETADGSAVCPPPTGRPVS
AAGSSPESGATTEDEFSPNGWEAEEESLTPPDDTRRTSSARTIQQAISSHAPTSTDEDWS
DIEIDLPEVRTGPAGGRRFDDEDLARLRLLLMQGLSVGFVNRSDIVEACADATESHEADL
EERIERLIGDLGLHIEDVSPSFGLDEHGAAESEDACEDALEYLRDICSGDNDPLKLYIRE
VGPHQALTREDEAFIARAMEEGVSQAIRTIASCKAALDQIIDAGDAVCRGEADAGSMFDR
AAGNPEDEPHESAFGLSSTMQDDEQDQASDDAGRQQMQLQPELGAALADLRRLVYSLPAS
TEVPVAAQGRIVSLLNALGLNFDFLEAVCNTLLASPDHRDIGAAVAVALNSALDHRNRMI
KSNLRLVISIAKKYTHTGFPFLDLIQEGNLGLMKAVEKFDYRRGFKFSTYATWWIRQAIT
RGIADQQRLVRVPVHMVESINKVSRVLRELEGRAPRKTSASPALGKITTS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgatccggccccattccggaagaagcccttgaatccgcttctgaaaatggcagct
gtagctggcgtgcagacagccatcagactgcacatccgccgcggtgacgatctggatgcc
gtcgaggagaacggtcgaacgccgctcatgcttgccgcagtccgggggcacgccgacgtc
tgcaaactgcttctcgacgcgggagcagacccgcttctcaccgatcacgaagggcgagat
gccgtcggtcttgccttggcagcagggaagaccggagttgtggaagttctaatgcagttc
cgagtcgaaaccgcggacggttccgcggtatgccctccacctacgggcaggccggtttcc
gcagctggctcatcacccgagtcgggcgcgacgacagaggatgaattcagtccaaatggc
tgggaggcggaagaagagtcgctcacaccacccgatgacactcgacgcacaagttcagca
aggaccattcagcaggcgatctcctcgcatgcaccaacgagcaccgacgaggactggtca
gatatcgaaatcgatcttcccgaggtccgcactggccccgcgggaggaaggcgttttgat
gacgaggatctcgcacgtctccgccttctgctcatgcagggcctgtcagtcgggttcgtg
aaccgctcggatatcgtcgaagcgtgcgccgatgcaacagaatcacatgaggccgacctt
gaggagcgtatcgagcggctgattggcgacctggggctccacattgaggacgtttcgcct
tcctttggtcttgatgaacacggcgctgccgagtcggaggacgcttgtgaggatgccctc
gagtatctccgcgacatctgttctggcgacaacgatccgttgaaactgtatatccgggag
gtggggccccatcaggcactcacacgtgaggatgaagccttcatcgcacgcgcgatggag
gagggagtatcgcaagcgatacgtacaattgcctcatgcaaggcagcactcgaccagatt
atcgacgctggagatgcggtctgccgcggggaggcagatgccggatcaatgtttgatcgg
gccgcaggcaatccagaggacgaaccgcacgaatccgcctttggactgtcatccaccatg
caggatgacgaacaggatcaagcatccgacgatgcaggtcgccagcagatgcaactccag
ccagaactcggtgcagcactggccgatttgcgcaggcttgtgtactcgcttcccgccagt
accgaagtccctgtcgccgctcaggggcggattgtctccctactgaatgcccttggactg
aacttcgatttcctggaagcagtgtgcaacacgctcctcgcttcgcccgatcatcgggac
atcggagccgcggtcgctgtcgccctgaattccgctctggatcacagaaatcgaatgatc
aagtcgaaccttagactggtcatttcgattgcaaagaagtacacacatacgggcttcccg
ttcctcgatctgatccaggaaggcaacttgggcctcatgaaggcggtcgagaaattcgac
tatcgtcgcggcttcaagttttcgacttacgcaacctggtggatcaggcaggccatcacg
cgcggcattgccgatcagcaacgccttgtccgggttcccgtccatatggtcgaatcaatc
aacaaggtgtcgcgcgtccttcgcgaactcgagggacgggcgcctcgaaaaacctccgcc
tcgcccgcccttggtaaaattacgacgtcctga
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