Thauera aminoaromatica: Tmz1t_1189
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Entry
Tmz1t_1189 CDS
T00804
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
tmz
Thauera aminoaromatica
Pathway
tmz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tmz1t_1189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmz03021
]
Tmz1t_1189
Transcription machinery [BR:
tmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmz1t_1189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF1376
SPO22
RRN3
Halogen_Hydrol
Motif
Other DBs
NCBI-ProteinID:
ACK53948
UniProt:
C4ZKA0
LinkDB
All DBs
Position
complement(1317171..1319171)
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AA seq
666 aa
AA seq
DB search
MAREKAKDPRKDAPAKGRPAKAKDKAAPVVESPAATPLDAEVRRTRLKTLITLGKERGYL
TYAEISDHLPDDVADAEQIEGIIATFNNMGIQVYDEAPAAEDLLMSDSVATNVDEDVAEE
EAEQALSSVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEDGLKHMVQAISACP
TTIAEMLGIVDRIAADDAKIDELVDGLIDPNAGSAEEAAAEEESADEDTEAEEDEGAEDE
DEGDDEEDSAESAERANAASLLQLKNDALARFDVIRGLYEKKMQALEKRGSQDLSYLALQ
QQISDELLNIRFTAKAIEKLCDSVRHMVEQVRSHERQILQLCVDRAGMPRQHFIKVFPGQ
EVNLDWLKDEIAAGKNYADGLMRIHPAVLEEQQKLIDLQDRIGIPLKELKDINRQMSTGE
AKMRRAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFST
YATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGQEPDPATLAEKMEM
PEEKIRKIMKISKEPISMETPIGDDDDSHLGDFIEDTATLAPAEAAMYSGLRDATCEVLD
SLTQREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEKLRS
FLDSDA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgaaaaagccaaggacccacgcaaggacgcccccgcgaagggccgccctgcc
aaggccaaggacaaggcagccccggtggtcgaaagccccgccgccaccccgctcgacgcg
gaggtgcgccgcacccggctgaagacgctgatcacgctcggcaaggaacgcggctatctc
acctacgccgagatcagcgaccacctccccgacgatgtggccgatgccgagcagatcgaa
ggcatcatcgccaccttcaacaacatgggcatccaggtctatgacgaggcgccggccgcc
gaagacctgctcatgtcggacagcgtcgccaccaacgtggacgaggacgtcgccgaagag
gaagccgaacaggcgctgtcctcggtcgactccgaattcggccgcaccaccgacccggtg
cgcatgtacatgcgcgagatgggcacggtcgagctgctcacccgcgagggcgagatcgag
atcgccaagcgcatcgaggacggcctcaagcacatggtgcaggccatctccgcctgcccg
accacgatcgccgagatgctcggcatcgtcgaccgcatcgccgccgacgatgccaagatc
gacgagctggtcgacggcctgatcgaccccaacgccggcagcgccgaggaagcggccgcg
gaggaggagtccgccgacgaggacaccgaggccgaagaggacgagggcgcggaggacgag
gacgagggcgacgacgaggaagacagcgccgagagcgccgagcgcgccaatgccgcctcg
ctgctgcaactcaagaacgacgcgctcgcccgcttcgacgtcatccgcgggctgtacgag
aagaagatgcaggcgctcgagaagcgtggctcgcaggacctctcctacctcgcgctgcag
cagcagatctccgacgagctgctcaacatccgcttcaccgccaaggccatcgagaagctg
tgcgactcggtgcgccacatggtcgagcaggtgcgcagccacgagcgccagatcctgcag
ctgtgcgtggatcgcgccggcatgccgcgccagcacttcatcaaggtgttccccggccag
gaagtgaacctcgactggctcaaggacgagatcgccgccggcaagaactacgccgacggc
ctgatgcgcatccaccccgcggtgctcgaggagcagcagaagctcatcgacctgcaggac
cgcatcggcatcccgctcaaggaactcaaggacatcaaccgccagatgtccaccggcgaa
gccaagatgcgtcgcgccaagcgcgagatgaccgaggccaacctgcgcctggtgatctcg
atcgcgaagaagtacaccaaccgcggcctgcagttcctcgacctcatccaggaaggcaat
atcggcctgatgaaggcggtggacaagttcgaataccgccgcggctacaagttctcgacc
tatgccacgtggtggatccgccaggccatcacgcgctcgatcgccgaccaggcgcgcacc
atccgcatcccggtgcacatgatcgagacgatcaacaagatgaaccgcatcagccgccag
atcctgcaggagaccggtcaggagccggatcccgcgacgctggccgagaagatggagatg
cccgaggagaagatccgcaagatcatgaagatctccaaggagccgatctccatggagacg
ccgatcggcgacgacgacgactcccacctgggcgacttcatcgaggacaccgccaccctg
gccccggccgaggcggcgatgtactccggcctgcgcgacgccacctgcgaggtgctcgac
tcgctgacccagcgcgaggccaaggtgctgcgcatgcgcttcggcatcgagatgaacacc
gaccacacgctggaagaggtcggcaagcagttcgacgtcacccgcgagcgcatccgccag
atcgaagccaaggccctgcgcaagctgcgccacccgagccgctccgagaagctgcgcagc
ttcctcgacagcgacgcgtaa
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