Thauera aminoaromatica: Tmz1t_1204
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Entry
Tmz1t_1204 CDS
T00804
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03420
Nucleotide excision repair
tmz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tmz1t_1204
03430 Mismatch repair
Tmz1t_1204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_1204
Enzymes [BR:
tmz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tmz1t_1204
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tmz1t_1204
MMR (mismatch excision repair)
Other MMR factors
Tmz1t_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACK53963
UniProt:
C4ZKB5
LinkDB
All DBs
Position
1333229..1335463
Genome browser
AA seq
744 aa
AA seq
DB search
MSTLLSNLNPEQLQAVSLPAQHALILAGAGSGKTRVLTTRIAWLIQSGQVDPAGILAVTF
TNKAAKEMLARLGAMLPVSTRGMWIGTFHGLANRLLRAHHRDAGLPQLFQILDSADQLAA
IKRLLKTLNVDDEKFPPRELQHFINGQKEAGNRPHVVEAWDDYTRLRVQLYQEYEAQCQR
ESVVDFAELLLRSHELLERNELLRRHYQRRFRHILVDEFQDTNRLQYRWLKLFADEGREG
GAAMFCVGDDDQSIYRFRGAEVGNMRDFEREFRVNNVIRLEQNYRSHANILDAANAIILH
NSNRLGKNLWTDQGAGEPIRVFEAYADADEARWIVEEIQALVRDGALRSEIALLYRSNAQ
SRVLEHQLFAAGIPYRVYGGLRFFERQEIKHALAYLRLIANPDDDTSFARVVNFPTRGIG
ARSLEVLADAARTYSTSLYATVPHLSGKPGSALAVFVRLVEELRRDTAGLPLPELVDHVL
DLSGLRAHYKADKEGRERLENLDELINAAANFLAEAQAQAGAGEAQPHALLADFLAHASL
EAGDHQADQGADAVQLMTVHAAKGLEFDVVFLSGLEEGLFPHENSILEQDGLEEERRLMY
VAVTRARERLYLSFAQSRMLHGQTRYNLRSRFLEEIPAGLTKWLTPPQPRSAAGGAMGGM
GGGYFKPSAKSAVGGAAQVQRAPRPAFATLPGGLRIGQAVAHAKFGQGVIVAAEGSGSDA
KVQINFGPAGVKWLLLGVAKLEPV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctgctgagcaacctgaaccccgaacaactgcaggcggtgagcctgcccgcg
caacacgccctgatcctggccggagccggctcgggcaagacgcgcgtgctcaccacccgc
atcgcctggctgatccagtccggccaagtcgacccggccggcatcctcgcggttacattt
accaacaaagccgccaaggaaatgctcgcccgcctcggcgcgatgctgccggtgagcacc
cgcggcatgtggatcggcaccttccacggcctggccaaccgcctgttgcgcgcccaccac
cgcgacgccgggttgccgcagctcttccagatcctcgactcggctgaccagctcgccgcg
atcaagcgcctgctgaagaccttgaacgtcgacgacgagaagttccctccgcgcgagctc
cagcatttcatcaacggccagaaggaagccggcaaccgcccgcacgtggtcgaggcctgg
gacgactacacccgcctgcgcgtgcagctctaccaggagtatgaggcgcagtgccagcgc
gagtctgttgtggattttgcggagttgctgctgcgcagccacgaactgctcgagcgcaac
gagctgctgcgccgccactaccagcgccgcttccgccacatcctggtcgacgagttccag
gacaccaaccgcctgcagtaccgctggttgaagctcttcgccgacgagggccgtgaaggc
ggtgcggcaatgttctgcgtcggcgacgacgaccagagcatctaccgcttccgcggcgcc
gaggtcggcaacatgcgcgatttcgagcgcgagttccgggtgaacaacgtgatccgcctg
gagcagaactaccgctcgcacgccaacatcctcgacgccgccaacgcgatcatccttcac
aacagcaaccgcctcggcaagaacctgtggaccgaccagggcgcgggcgagccgatccgt
gtcttcgaggcctatgcggatgccgacgaggcgcgctggatcgtcgaggagatccaggcc
ctggtgcgcgacggcgcgctgcgcagcgagatcgcgctgctctaccgctccaacgcgcag
tcgcgcgtgctcgagcaccagctcttcgcggccggcattccctaccgcgtgtatggcggg
ctgcgcttcttcgagcgccaggagatcaagcacgcgctcgcctacctgcgcctgatcgcc
aaccccgacgacgacacctcgttcgcccgcgtggtgaactttcccacccgcggcatcggc
gcgcgctcgctcgaggtgctggccgacgccgcgcgcacgtacagcaccagtctctacgcc
accgtgccgcatctgtccggcaagcccggcagcgcgctcgcggtcttcgtgcgcctggtc
gaggagctgcgccgcgacaccgccggcctgccgctgcccgagctggtcgatcatgtgctc
gacctgagcgggctgcgcgcgcactacaaggccgacaaggagggccgcgagcgcctcgag
aacctcgacgaactgatcaacgccgcggccaacttcctcgccgaggcgcaggcccaggcg
ggcgccggcgaggcgcagccgcacgcgctgctggcggatttcctcgcccacgcctcgctg
gaggcgggcgaccaccaggccgaccagggcgcggacgcggtgcagctgatgaccgtgcat
gcggccaagggcctggagttcgacgtggtcttcctgtccgggctggaggagggcctgttc
ccgcacgagaacagcatcctcgagcaggacgggctggaggaggagcgccgcctgatgtac
gtcgcggtgacgcgggcgcgcgagcgcctgtacctgagtttcgcgcagagccgcatgctg
cacgggcagacgcgctacaacctgcgctcgcgtttcctggaggagatccccgccgggctg
accaaatggctcaccccgccccagccgcgctcggccgccggcggcgcgatgggcgggatg
ggcgggggctacttcaagccctcggccaagtccgcggtggggggcgcggcgcaggtgcag
cgcgcaccgcgcccggccttcgccacgctgcccggcggcctgcgcatcggccaggcggtg
gcgcatgcgaaattcggccagggcgtgatcgttgccgccgaaggcagcggcagcgatgcc
aaggtgcagatcaacttcggtccggcgggcgtcaagtggctgctgctcggcgtggccaag
ctcgagccggtgtga
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