Thauera aminoaromatica: Tmz1t_1583
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Entry
Tmz1t_1583 CDS
T00804
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03030
DNA replication
tmz03430
Mismatch repair
tmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tmz1t_1583
03430 Mismatch repair
Tmz1t_1583
03440 Homologous recombination
Tmz1t_1583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmz03032
]
Tmz1t_1583
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_1583
Enzymes [BR:
tmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tmz1t_1583
DNA replication proteins [BR:
tmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tmz1t_1583
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tmz1t_1583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACK54341
UniProt:
C4ZPE5
LinkDB
All DBs
Position
1762601..1766125
Genome browser
AA seq
1174 aa
AA seq
DB search
MNPAAPSTAEAPIVPSAPRFVHLRLHSEYSITDGIVQLDQAIAAAAADGMPALGVSDLAN
LFGMVKFYKGARGKGIKPIVGVDAWIRNEAERDKPQRVLLICKNRAGYGQLCELLTRAYL
ENKHRGRAEMRREWFENGAASALLCLSGAMSGDIGAAIAAGNLALAEQLAADWARLFPDA
FYIEIQRAGHPGTESYIRHAVELAGRLGLPVVATHPVQFLKREDFKAHEARVCIAQGYVL
ADKRRPRDFTEEQYLKSQAEMCELFADLPEALENAVEIARRCSLTVQLGKNFLPLFPTPE
GMTLDDFLVAEAKKGLEERLAQLYPHPEERERQRPRYEQRLKFETDTIIQMGFPGYFLIV
ADFIQWGKNNGVPVGPGRGSGAGSLVAYSLKITDIDPLEYALLFERFLNPERVSMPDFDI
DFCQDNRYRVIEYVRERYGKDAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIP
IEGAKPVSLNKAYEMEPQIGEMMADGNDGESVRDLWSLAQPLEGLSRNVGMHAGGVLIAP
GKLTDFCPLYIADGDDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIELALEYVARLEGS
RPDLMSLGFEDPAAYQILKDANTTAIFQVESDGMKKLLKKLAPDRFEDIIAVLALYRPGP
LGSGMVDDFILRKKGQQEIDYFHPDLKACLEPTYGVIVYQEQVMQISQIIGGYTLGGADM
LRRAMGKKKADEMAKHRATIAEGAKQKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVV
TYHTAWLKAHHCAAFMAATMSSDLDNTDTVKIFYEDTLANGIKVLPPDVNASDYRFVPVD
RKIIRYGLGAVKGVGEPAVRAILAAHEKGGDFRDLFDFCERVDRRMVNRRVIEALIRAGA
MDTLPGHKGLDRAQLMATVALAMEAAEQAAANAMQGGLFDLMPEAAGAAPEFAKVRAWTE
RERLKEEKLAIGFFLSGHPFNAFKPEVRRFVRRTLAQLEPSRDITMLAGVVMEQRTKVGN
RGKMAFVLLDDGTEPREVTVYSEVLEASRGKIVTDEVLVVEAKVSNDDFSGGLRINADRL
LTLGEARSRFARALSLRIDGELAASGGAAGAAGKLQTLLEPFREGGCPIRVRYRNAAAEA
ELPLGDGWRVRLDDALLESLREWLPGEAVEVVYP
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgctgccccctccacggccgaagcgcccatcgtgccgagcgctccgcgcttc
gtgcatctccgcctgcactccgaatattcgatcaccgacggcatcgtccagctcgaccag
gcgatcgccgccgccgcggccgacggcatgccggcgctcggcgtctccgatctcgccaac
ctgttcggcatggtcaagttctacaagggcgcgcgcggcaagggcatcaagcccatcgtc
ggcgtcgacgcctggatccgcaacgaggccgagcgcgacaagccgcagcgcgtgctgctc
atctgcaagaaccgcgcgggctatggtcagctgtgcgagctgctgacgcgcgcctacctc
gagaacaagcaccgcggccgcgccgagatgcgccgcgagtggttcgagaatggtgccgca
agcgcgctgctgtgcctgtcgggtgcgatgagcggcgacatcggcgcggcgatcgcggcc
ggcaacctcgcgctcgccgaacagctcgcggccgactgggcgcggctgtttccggacgcc
ttctacatcgagatccagcgcgccgggcatcccggcaccgagtcctacatccgccacgcg
gtggaactcgccggccggctcggcctgccggtggtggcgacccacccggtgcagttcctc
aagcgcgaggatttcaaggcacacgaggcgcgcgtctgcatcgcgcagggctacgtgctc
gccgacaagcgccggccgcgcgacttcaccgaggagcagtacctcaagagccaggcggag
atgtgcgagctcttcgccgatctgcccgaggcgctcgagaacgcggtcgagatcgcgcgc
cgctgctcgctcaccgtgcaactcggcaagaacttcctgcccttgttcccgacgcccgag
ggcatgacgctcgacgacttcctcgtcgcggaggcgaagaaggggctggaggagcgcctc
gcccagctctacccgcacccggaggagcgcgagcgtcagcgcccgcgctacgagcagcgg
ctgaagttcgagaccgacaccatcatccagatgggcttccccggctacttcctgatcgtg
gccgacttcatccagtggggcaagaacaacggcgtgccggtcggaccggggcggggctcc
ggcgcgggctcgctggtggcctactcgctcaagatcaccgacatcgaccccctcgagtac
gcgctgctgttcgagcgcttcctcaaccccgagcgggtgtcgatgcccgacttcgacatc
gacttctgccaggacaaccgctaccgcgtcatcgagtacgtgcgcgagcgctacggcaag
gacgcggtgagccagatcgccaccttcggcaccatggcctcgaaggcggtggtgcgcgac
gtcggccgcgtgctggatctgccttacggcctgtgcgaccgcctctccaagctgatcccg
atcgagggcgccaagcccgtctcgctgaacaaggcctacgagatggagccgcagatcggc
gagatgatggccgacggcaacgacggcgagtcggtgcgcgacctgtggagcctggcgcag
ccgctggagggcttgagccgcaacgtcggcatgcacgccggcggcgtgctgatcgcgccc
ggcaagctcaccgacttctgtccgctctacatcgccgacggcgacgacgccacgccggtg
tcgcagttcgacaaggacgacgtcgaagccgtgggcctggtcaagttcgacttcctcggc
ctgcgcaacctgaccatcatcgagctcgcgctggagtacgtggcgcgcctggagggcagc
cgtccggacctgatgagcctgggcttcgaggatcccgccgcctaccagatcctcaaggac
gccaacaccacggcgatcttccaggtcgaatcggacggcatgaagaagctgctcaagaag
ctcgcgcccgaccgcttcgaggacatcatcgcggtgctcgcgctctaccgtcccggcccg
ctcggctcgggcatggtggacgacttcatcctgcgcaagaagggccagcaggagatcgac
tacttccaccccgacctcaaggcctgcctggagccgacctacggcgtgatcgtgtaccag
gaacaggtgatgcagatctcccagatcatcgggggctacacgcttggcggtgccgacatg
ctgcgccgcgcgatgggcaagaagaaggccgacgagatggccaagcaccgcgccaccatc
gccgagggtgcgaagcagaagggctatgacccggcgctcgccgagcagctcttcgacctg
atgaccaagttcgcggagtacggcttcaacaagtcgcacaccgcggcctacgcggtggtc
acctaccacaccgcctggctcaaggcgcaccactgcgcggccttcatggcggcgacgatg
tcgtccgacctggacaacaccgataccgtcaagatcttctacgaagacacgctcgccaac
ggcatcaaggtgctgccgccggatgtcaacgcctccgactaccgcttcgtgccggtggat
cgcaagatcatccgctacggcctgggcgcggtgaagggcgtgggcgagcctgcggtgcgc
gcgatcctcgccgcgcacgagaagggcggagacttccgcgacctgttcgatttctgcgag
cgcgtcgatcgccgcatggtaaaccgccgcgtcatcgaggcgctgatccgcgccggcgcg
atggacaccctgccgggccacaagggcctggaccgcgcgcagctgatggcgaccgtcgcg
ctggcgatggaggcggccgaacaggcggcggccaacgcgatgcagggtgggctcttcgac
ctgatgccggaggccgcgggcgcggcgcccgagttcgccaaggtgcgtgcgtggaccgag
cgcgagcgcctcaaggaagagaagctcgcgatcggcttcttcctctccggccatcccttc
aacgccttcaagcccgaggtgcgccgcttcgtgcgccgcacgctggcgcagctcgagccc
tcgcgcgacatcaccatgctggccggcgtggtgatggagcagcgcaccaaggtcggcaac
cgcggcaagatggccttcgtgctgctcgacgacggtaccgagccgcgcgaggtcacggtg
tattccgaggtgctggaggcgagccgcggcaagatcgtcaccgacgaggtgctggtggtg
gaggccaaggtgagcaacgacgatttctccggtggcctgcgcatcaacgccgaccgcctg
ctcaccctcggcgaggcgcgcagccgtttcgcacgcgcgctgtcgctacgcatcgacggc
gagcttgccgccagcggcggtgcggcgggcgcggccggcaagctgcagaccctgctcgag
cccttccgcgagggcggctgcccgatccgcgtccgctatcgcaacgccgccgccgaagcc
gagctcccgctcggcgacggctggcgcgtgcgcctggacgacgcgctgctggagagcctg
cgcgaatggctgccgggcgaggcggtcgaggtggtgtacccctga
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