Thauera aminoaromatica: Tmz1t_1847
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Entry
Tmz1t_1847 CDS
T00804
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tmz1t_1847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_1847
Enzymes [BR:
tmz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tmz1t_1847
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tmz1t_1847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Helicase_RecD
AAA_22
PhoH
UvrD-helicase
AAA_25
SLFN-g3_helicase
DEAD
AAA_28
Mg_chelatase
AAA_5
TraI_hel_assoc_N
nSTAND3
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ACK54599
UniProt:
C4ZM85
LinkDB
All DBs
Position
complement(2073454..2075505)
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AA seq
683 aa
AA seq
DB search
MSPIHASPSPAAAPHAATAPSAPTDALLATLDAWTDAGLLRQLDSAFARFIASLDPAAPP
ALLVGAAVLARMEGRGHSCLPLAPLAATDQDLLAWPMEAQAAIAALWQNLPADSAAWLAA
LQQSPVVRRIGHDPELGQPLLVDGPDTAPRLYLRRYWQYERSVAAAVAARCAQPEPVDEA
RARTWLDRLFPAAPGTPAHEAAVDWQKLACAIALRGRLSILTGGPGTGKTYTAARLLALM
LATHPAPERLRIALAAPTGKAAARLRQAIDGSLQALQRSLGGHLDLAALTRRIGAARTLH
ALLGARPDTRRFRHHAGNPLDVDVVIVDEASMVHLEMMAALLEALPHGARLVLLGDKDQL
ASVEAGAVLGDLCRDASDGRYDAETARYLLATTGEALPTRYLEPTDKAPALAQHTVMLRE
SRRFEGPIGALAHAVNAARDPALPARLLREDASGALHGVEGGPVAAVIALALGGRRGAPA
CYRDYLELLARGPAGKDAEAHAAWATAILHAFDRFRVLCAVREGDWGMAGLNRAIEHALA
RARLLSPRGTWYAGRPVMVTRNDPALGVFNGDIGITLPALESGGLRVHFLDGEALRSVAA
SRLAHVETAFAMTVHKSQGSEFEHTVLVLAAQSGNVLVRELIYTAITRARKAFSLVAERE
GLLEHGVLQATRRESGLLDFQGT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagccccatccacgcttcgccctcgcctgccgcggcgccacacgcggcgacagcgccc
tccgcgccgaccgacgccctcctcgccaccctcgacgcctggacggacgccggcctgctg
cgccagctcgacagcgccttcgcccgtttcatcgccagcctcgaccccgccgcgccgccc
gcgctgctggtgggcgcagcggtgctggcgcgcatggagggccgcggccatagctgcctg
ccgctcgccccgctcgccgcgaccgaccaggatctgctggcctggccgatggaggcccaa
gcggcgatcgccgcgctgtggcagaacctgcccgccgattccgccgcctggctggcggcg
ctgcagcaaagccccgtggtgcgccgcatcggccacgaccccgaactcggccagcccctg
ctggtggacggacccgacaccgcaccgaggctctacctgcgccgttactggcagtacgag
cgcagtgtcgccgccgcggtggcggcgcgctgcgcgcaacccgagccggtcgacgaggcg
cgtgcgcgcacctggctggaccgcctctttccggccgcgcccggcactccggcccacgag
gcggcggtcgactggcagaagctcgcctgcgcgatcgccttgcgcgggcgcctgagcatc
ctcaccggcggccccggtaccggcaagacctacaccgccgcgcgcctgctcgcgctgatg
ctcgccacccacccggcgcccgagcgcctgcgcatcgcgctcgccgcccccaccggcaag
gccgccgcgcgcctgcgccaggccatcgacggctcgctgcaggccctccagcgcagcctg
ggcggccacctcgacctcgccgcgctgacccgccgcatcggcgccgcgcgcaccctgcac
gcgctgctcggcgcccgtcccgacacgcggcgcttccgccaccacgccggcaatccgctc
gacgtggacgtggtgatcgtggacgaagcctcgatggtgcacctggagatgatggccgcc
ctgctcgaagccctgccgcacggcgcgcgactggtgctgctcggcgacaaggaccagctc
gcgtcggtcgaggccggcgcggtgctcggcgacctctgccgcgacgcctcggacggacgc
tacgacgccgagaccgcacgctacctgctcgccaccaccggcgaggccctgcccacgcgc
tacctggagcccacggacaaggcgcccgcgctcgcccagcacaccgtgatgctgcgcgag
agccggcgcttcgaggggccgatcggcgcgctcgcgcacgcggtcaacgcggcgcgcgac
ccggccctgcccgcgcgcctgctgcgcgaggatgcgagcggcgcgctgcacggggtcgag
ggcggaccggtggcggcggtgatcgcgctcgcgctcggcggccgcaggggcgcacccgcc
tgctaccgcgactatctggagctgctcgcacgcggaccggcaggcaaggacgccgaggcg
cacgcagcgtgggcgacggcgatcctgcacgccttcgaccgcttccgcgtgctgtgcgcg
gtgcgcgaaggcgactggggcatggccgggctcaaccgcgcgatcgagcacgcgctcgcg
cgcgcgcgtctgctgtcgccacgcgggacctggtacgccgggcgcccggtcatggtcacc
cgcaacgaccccgcgctcggcgtcttcaacggcgacatcggcatcaccctgccggcgctc
gagagcggcggcctgcgggtgcacttcctcgacggcgaggccttgcgctcggtggcggcg
agccgcctcgcccatgtcgagaccgcgtttgcgatgacggtgcacaagagccagggctcg
gagttcgagcacacggtgctggtgctcgccgcgcagagcggcaacgtgctcgtgcgcgag
ctgatctacaccgcgatcacgcgcgcccgcaaggccttcagcctggtggccgaacgcgag
ggcctgctggagcatggcgtgttgcaggcgacccggcgcgagagcgggctgctggacttt
cagggaacgtag
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