Thauera aminoaromatica: Tmz1t_1849
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Entry
Tmz1t_1849 CDS
T00804
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tmz1t_1849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_1849
Enzymes [BR:
tmz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tmz1t_1849
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tmz1t_1849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
GDH_C
Motif
Other DBs
NCBI-ProteinID:
ACK54601
UniProt:
C4ZM87
LinkDB
All DBs
Position
complement(2079464..2083120)
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AA seq
1218 aa
AA seq
DB search
MPSKMTAPAPAASLPPGFIALHGNRIETLLDTVAGWLAQHPLAPLESEVILVQSNGMAEW
VKMAIARRAGVCAAAAVQLPARFQWQTYRQVLGRAQVPARSPLDKTALAWRLMRLLPEVL
AEPGFAPVAGYLADNDPGRRFQLALRIADLYDQYQVHRPDWLDAWGEGREALPDAGRGET
PLTGRGETPLAGRGETPLPEDQRWQARLWQRVVDELDPQQRALTRPQLHDRVLAALDAIA
EDAALHPAAALPRRVVLFGMTHVPLPTLQLLAALSRHAQVLLAIPNPCRFHWADILDGRE
WLRIARRRQPLRDGRELQDVGLDAMHLHAHPLLAAWGRQARDFVRQLDAFDDAEQTRARF
PLARIDLFDDDQDTHDVAQPTLLVQVQRHIRDLTPLAEHPHPPVPAEDRSIVFHLAHSPV
RELEILHDQLLALLARPPGDKPLRPRDIVVMVPSIDDFAPAIRAVFGQYGRHDPRHIPFD
IADLSARASSPLMGAVEWLLRIRHDRCRLSDLGALLDVPAIAARFGLAEEGLPRLTGWMR
GAGIRWGLDARHRAGLGLQACGEQNSALFGLRRMLMGYAAGRSEVTTDAPFAGIEPYDEV
GGLDAELAGALAHLVERLIRWQADSRRPATPAAWTQRLRALLADLVRAVDDTDRQTLAAL
DDALERWLEACDEAAFEAELPLAVAAEAWLAALESPALDKRFRAGGVTFCTLMPMRAIPF
EVVCLLGMNDGDYPRRSPRSDFDLMALPGQQRPGDRARRDDDRQLMLEALLSARRVLYLS
WCGRNVRDNSVQPPSVLVAQLRDYLAAGWSPAVVAERTVEHPLQPFSRRYFEPGTPLLTY
AREWRAAHVEAAAQDDAVPSHDGQANREATGRATRPTRGEAASPPLPPFVPDPAVPLTIA
ALAAFLRNPVKVFFRERLGVVYEDVDEALPDDEAFGFDGLEEHGLVEELAAAVLADLALL
PPPELHAFALEAAVEAQLGRIERAGRLPIGGLGLRARAALGEAVLPLLRAWRLVRASHPL
DAERGNLRFAHAGALMEDWLDHRVRADEHALPSWLAHDPGRLLEDADKGTLRPWRLLLPW
VRSLLAAAADSPSGGLLVGRDATVHIVPTDPAVARALLARLIEAWIAGLGEPLPVAARTA
LALVGEGKPAEAYEGSEHRRGEVEEASLARCYPDYAALIEDGRFEHLARALYGPLLEWMD
SHVEAVPHPAPETQESAR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaagatgaccgcccctgcccccgccgcctccctcccccccggcttcatcgcc
ctgcacggcaaccgcatcgagaccctgctcgacaccgtcgccggctggctggcgcagcat
ccgctcgcccccctcgaatccgaggtgatcctggtgcagagcaacggcatggcggaatgg
gtgaagatggcaatcgcgcgccgggccggggtatgcgcggcggcggcggtgcaactgccg
gcgcgcttccagtggcagacctaccgccaggtgctcgggcgcgcgcaggtcccggcgcgc
tcgccgctcgacaagaccgcgctcgcctggcggctgatgcggctgctgcccgaggtgctg
gccgaacccggcttcgcgccggtcgccggctacctcgcggataacgaccccggccgccgc
ttccagctcgcgctgcgcatcgccgacctctacgaccagtaccaggtgcaccggcccgac
tggctcgacgcctggggagaagggcgcgaggcgctgcccgacgccggccgcggcgagact
ccactcaccggccgcggcgagactccactcgccggccgcggcgagaccccgctgcccgag
gaccagcgctggcaggcacggctgtggcagcgcgtggtcgacgagctcgacccgcagcag
cgcgcgctgacccggccgcaactgcacgaccgcgtgctcgcggcgctcgacgcgatcgcg
gaggacgccgccctgcacccggccgccgcgctgccgcgccgcgtcgtgctcttcggcatg
acccacgtgccgctgcccacgctgcagctgctcgccgcgctgtcgcgccacgcccaggtg
ctgctcgccatccccaacccctgccgcttccactgggccgacatcctggacgggcgcgag
tggctgcgcatcgcccgccgccgccagccgctgcgcgacggccgcgagctgcaggacgtc
gggctggacgcgatgcacctgcacgcccacccgctcctcgccgcctggggtcgccaggcg
cgcgacttcgtgcgccagctcgacgccttcgacgacgccgagcagacgcgcgcgcgcttc
ccgctcgcccgcatcgacctcttcgacgacgaccaggacacccacgacgttgcccagccc
accctgctcgtccaggtccagcgccacatccgcgacctcaccccgctcgccgagcatccg
cacccgccggtgccggccgaggaccgctccatcgtcttccacctcgcccacagcccggtg
cgcgagctcgagatcctccacgaccagctcctcgccctgctcgcccggccccccggggac
aagccgctgcgcccgcgcgacatcgtcgtgatggtgccctcgatcgacgacttcgcgccg
gcgatccgcgcggtcttcggccagtacggccgccacgacccgcgccacatccccttcgac
atcgccgacctgtcggcgcgcgcgagcagcccgctgatgggcgcggtggagtggctgctg
cgcatccggcacgaccgctgccggctgtccgacctcggcgccctgctcgacgtgcccgcc
atcgccgcccgcttcggccttgccgaggaggggctgccacggctcaccgggtggatgcgc
ggcgccggcatccgctggggcctcgacgcgcgtcaccgcgcagggctcggcctgcaggcc
tgcggcgagcagaacagcgcgctcttcggcctgcgccgcatgttgatgggctacgccgcc
gggcgttcggaggtcacgacggacgcgcctttcgccggcatcgagccctacgacgaggtc
ggcggcctcgacgccgagctcgccggcgccctcgcccacctggtcgagcgcctgatccgc
tggcaggccgacagccgccgacccgccacgcccgcggcctggacccagcgcctgcgcgcc
ctgctcgccgacctggtgcgtgcggtggacgacaccgaccgccagaccctggccgcgctc
gacgacgccctcgaacgctggctcgaggcctgcgacgaggccgctttcgaggccgagctg
ccgctcgccgtcgccgccgaggcctggctcgccgcgctcgagagccccgcgctcgacaag
cgcttccgcgccggcggggtcaccttctgcacgctgatgccgatgcgtgcgatccccttc
gaggtggtctgcctgctcggcatgaacgacggcgactatccgcgccgcagcccgcgcagc
gacttcgacctcatggccctgccgggccagcagcgcccgggcgaccgcgcccgccgcgac
gacgaccgccagctcatgctcgaggccctgctctcggcccgccgggtgctctacctgagc
tggtgcgggcgcaacgtgcgcgacaacagcgtgcagccgccctcggtgctggtcgcccag
ctgcgcgactacctcgccgcgggctggtcacccgcggtggtggccgaacgcaccgtcgag
cacccgctgcagcccttcagccggcgctacttcgagccgggcacgcccttgctcacctac
gcgcgcgagtggcgcgccgcacacgtcgaggcggcagcgcaggacgatgccgtgccgtcg
catgacgggcaggcgaaccgcgaagccacgggccgcgcaactcgtcccacgcgcggcgag
gctgcctccccgccgctgccccccttcgtccccgacccggcggtcccgctcaccatcgcg
gcgctcgccgccttcctgcgcaacccggtcaaggtcttcttccgcgagcgcctcggcgtg
gtgtacgaggacgtggacgaggccctgcccgacgacgaggccttcggcttcgacggtctc
gaggaacacggcctggtcgaggaactcgccgccgcggtactcgccgatctcgccctgctg
ccaccacccgagctgcacgccttcgcactcgaagccgcggtcgaggcccagctcggacgc
atcgagcgcgccggccgactgccgatcggcggcctcggcctgcgcgcccgcgccgcactc
ggcgaggccgtgctgccgctgctgcgcgcgtggcggctggtccgcgccagccatcccctc
gacgccgagcgcggcaacctgcgcttcgcgcatgccggcgcgctcatggaggactggctg
gaccaccgcgtgcgcgccgacgagcacgcgctaccctcgtggctcgcccacgaccctggc
cgcctgctcgaagacgccgacaagggcacgctgcgcccttggcgcctgctgctgccctgg
gtgcgcagcctgctcgccgccgcggcggacagcccgagcggcggcctgctggtcggccgc
gacgccaccgtccacatcgtccccaccgaccccgccgtcgcgcgcgccctgctcgcccgc
ctgatcgaggcctggatcgcgggcctgggcgagccgctgccggtggcggcccgcaccgcg
ctcgccctcgtcggcgagggcaagcctgccgaagcctacgagggcagcgagcaccggcgc
ggcgaggtcgaggaggccagcctcgcacgctgctatccagactacgccgcgctgatcgag
gacggccgcttcgagcacctcgcgcgcgcgctctacggcccgctgctcgaatggatggac
agccacgtcgaggccgtcccccacccggcacccgagacccaggagtctgcccgatga
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