Thauera aminoaromatica: Tmz1t_2438
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Entry
Tmz1t_2438 CDS
T00804
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tmz1t_2438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_2438
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tmz1t_2438
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tmz1t_2438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_18
Kinesin
Microtub_bd
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACR01041
UniProt:
C4K9G5
LinkDB
All DBs
Position
complement(2627515..2629602)
Genome browser
AA seq
695 aa
AA seq
DB search
MTTQGNSAGNDAPQQGGTVLGFEGSPFRLHQPFPPAGDQPEAIRLLCEGVEDGLMYQTLL
GVTGSGKTYTMANVIARMGRPALVLAPNKTLAAQLYAEFKEFLPENAVEYFVSYYDYYQP
EAYVPSRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSCIYGIGDPVDYHAMI
LHLREGERMAHRDLIQRLVAMQYTRADIDFRRGTFRVRGDVIDVFPAENAELAVRIEMFD
DEIEHLTLFDPLTGHLRHKLARFTVYPSSHYVTPRATVLQAIEAIKEELKERVAFFQREG
KLVEAQRIEQRTRFDLEMLNEMGFCKGIENYSRHLSGRGPGEPPPTLIDYLPQDALMFID
ESHVAIGQVGGMYKGDRSRKENLVGYGFRLPSALDNRPLKFDEFERLMPQTVFVSATPAK
YEEEHQGQVVEQVVRPTGLIDPMVEVRPAMTQVDDLLGEIKKRLAVNERVLVTVLTKRMA
EDLTDYLADNGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVT
ILDADKEGFLRSARSLIQTIGRAARHLHGTAILYADRITDSMKAAIGETERRRNKQIAFN
EANGIVPKSVTKRIKDIIDGVYDSDGAKRDAARVADKGSDYAVMDEKALARAIKRLEKEM
QEHARNLEFEKAAAARDELFKLRERAFGADQHGSV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcaaggcaatagcgccggaaacgatgcaccgcagcaaggcgggaccgtgctc
ggcttcgagggcagccccttccgcctgcaccagccgtttccgcccgccggcgaccagccc
gaggcgatccgcctgctgtgcgaaggcgtcgaggacggcctgatgtatcagaccctgctc
ggcgtgaccggctcgggcaagacctacaccatggccaacgtcatcgcccgcatggggcga
ccggccctggtgctggcgcccaacaagacgctggccgcgcagctctacgccgagttcaag
gagttcctgcccgagaacgcggtcgagtacttcgtcagctactacgactactaccagccc
gaggcctacgtgccctcgcgcgaccttttcatcgagaaggattcgtcgatcaacgagcac
atcgagcagatgcgcctgtcggcgaccaagagcctgatggagcgccgcgacgtggtcatc
gtggccacggtgtcgtgcatctacggcatcggcgatccggtcgactaccacgccatgatc
ctgcacctgcgcgagggcgagcgcatggcgcaccgcgacctcatccagcgcctggtggcg
atgcaatacacccgcgccgacatcgacttccgccgcggcaccttccgcgtgcgcggcgat
gtgatcgacgtcttcccggcggaaaacgccgagctcgcggtgcgcatcgagatgttcgac
gacgagatcgaacacctgaccctgttcgatccgctcaccggacacctcaggcacaagctg
gcgcgcttcaccgtctatccgtccagccactacgtgaccccgcgcgcgacggtgctgcag
gcgatcgaggcgatcaaggaggagttgaaggagcgcgtcgccttcttccagcgcgagggc
aagctggtggaggcgcagcgcatcgagcagcgcacccgcttcgacctcgagatgttgaac
gagatgggcttctgcaagggcatcgagaactactcccggcacctgtccgggcgcggtccg
ggcgagccgccgccgacgctgatcgactacctgccgcaggatgcgctgatgttcatcgac
gagtcgcacgtcgccatcggccaggtcggcggcatgtacaagggcgatcgctcgcgcaag
gagaacctcgtcggctatggcttccgcctgccctcggcgctggacaaccggccgctcaag
ttcgacgagttcgagcgcctgatgccgcagaccgtcttcgtgtcggcaaccccggcgaaa
tacgaggaagagcaccagggccaggtggtggagcaggtggtgcgcccgaccggcctgatc
gaccccatggttgaggtgcgcccggcgatgacgcaggtggacgacctgctcggcgagatc
aagaagcgcctggcggtaaacgagcgcgtgctggtcaccgtgctgacaaagcgcatggcc
gaggacctcaccgactacctcgccgacaacggcatccgcgtgcgctacctgcactcggac
atcgacaccgtggagcgcgtggagatcatccgcgacctgcgcctgggcgagttcgacgtg
ctggtgggcatcaacctgctgcgcgagggcctggacatccccgaggtgtcgctggtgacg
atcctggacgcggacaaggagggcttcctgcgttccgcgcgttcgctcatccagaccatc
ggccgcgccgcgcgccacctgcacggcaccgccatcctctacgccgaccgcatcaccgac
tcgatgaaggcggcgatcggcgagaccgagcgtcgccgcaacaagcagatcgccttcaac
gaggccaatggcatcgtgccgaagtcggtgacgaaacggatcaaggacatcatcgacggg
gtctatgattccgatggggccaagcgcgacgccgcacgcgtggccgacaagggcagcgac
tacgcggtgatggacgagaaggcgctggcgcgggcgatcaagcggctggagaaggagatg
caggagcacgcccgcaacctcgagttcgagaaggcggcggcggcgcgcgacgagctcttc
aagctgcgcgagcgcgccttcggcgccgaccagcatggcagcgtgtga
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