Thauera aminoaromatica: Tmz1t_3081
Help
Entry
Tmz1t_3081 CDS
T00804
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tmz1t_3081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmz03021
]
Tmz1t_3081
03019 Messenger RNA biogenesis [BR:
tmz03019
]
Tmz1t_3081
Transcription machinery [BR:
tmz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Tmz1t_3081
Messenger RNA biogenesis [BR:
tmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tmz1t_3081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
S1CSD-TOTE-2
Mor
NACHT
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACR01679
UniProt:
C4KBA3
LinkDB
All DBs
Position
3335262..3336716
Genome browser
AA seq
484 aa
AA seq
DB search
MTATSKPDQAPARSRGSSRARRRGARNRDGNSPQNPQTEDDLFDVENGGEEGSSTPRDPD
APALHLSELKALHVSQLLQMAMDAGVEGANRLRKQELVFALLRNRARRGEPICGDGALEV
LPDGFGFLRSPDTSYLAGTDDIYVSPSQIRRFNLRTGDTIEGEIRTPKDGERYFALTKLD
KINGRPPEECKTKILFENLTPLHPQECLKLEREVRGEENVTSRIIDMIAPIGKGQRGLLV
APPKSGKTVMLQHIAHAITANHPDVKLIVLLIDERPEEVTEMLRSVKGEVVASTFDEPAT
RHVQVAEMVIEKAKRLTEHKYDVVILLDSLTRLARAYNTVVPASGKVLTGGVDANALQKP
KRFFGAARNIEEGGSLTIIATTLVDTGSRMDDVIYEEFKGTGNMELHLDRRMAEKRVYPA
INVNRSGTRREELLLKADVLQKVWILRKLLYGMDDIDAMEFLLDKVKATKSNAEFFDAMR
TGRG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttgacagcaacatctaagccggaccaggctccggcccgttcccgcggttcctcgcgcgcc
cgtcgccgcggcgcgcgcaaccgggacggcaattccccccagaatccgcagaccgaagac
gatctgttcgacgtcgagaacggcggcgaggaaggttcttccacgccgcgcgaccccgac
gcgcccgcgctccacctgtccgaactcaaggccctgcacgtcagccagctgctgcagatg
gcgatggacgccggtgtcgagggcgcgaacaggctgcgcaagcaggaactcgtcttcgcg
ctgctgcgcaaccgtgcccgcaggggcgaaccgatctgtggcgacggcgcactcgaagtg
ctgcctgacggcttcggcttcctgcgctctcccgacacctcgtatctcgcggggacggac
gacatctacgtgtcgccctcgcagatccggcgcttcaacctgcgcaccggcgacaccatc
gagggcgagatccgcacgcccaaggacggcgagcgctacttcgcgttgaccaagctcgac
aagatcaacgggcggccgccggaagagtgcaagaccaagatcctcttcgagaacctcacg
cccctgcatccgcaggagtgcctgaagctcgagcgcgaggtccgtggcgaggagaacgtc
accagccgcatcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtc
gccccgcccaagagcggcaagacggtcatgctgcagcacatcgcgcacgcgatcacggcc
aaccatcccgacgtcaagctgatcgtgctgctgatcgacgagcgcccggaggaagtgacc
gagatgctgcgttcggtgaagggcgaggtcgtggcctccaccttcgacgagcccgccacc
cgtcacgtgcaggtcgccgagatggtgatcgagaaggccaagcgcctgaccgagcacaag
tacgacgtggtgatcctgctcgactcgctgacccgtctggcgcgcgcctacaacaccgtg
gtgccggcctccggcaaggtgctcaccggtggtgtcgacgccaacgcgctgcagaagccc
aagcgcttcttcggtgcggcgcgcaacatcgaggaaggcggctcgctgaccatcatcgcc
accacgctggtcgacaccggcagccgcatggacgacgtgatctacgaggaattcaagggc
accggcaacatggagctccacctcgaccgccgcatggcggagaagcgcgtgtatccggcg
atcaacgtcaaccgctccggcacccgccgcgaggagctcctgctcaaggccgacgtgctg
cagaaggtgtggatcctgcgcaagctgctgtacggcatggacgacatcgacgcgatggaa
ttcctcctcgacaaggtcaaggccaccaagagcaacgccgagttcttcgacgcgatgcgc
accggccgcggctga
DBGET
integrated database retrieval system
