Thauera aminoaromatica: Tmz1t_3312
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Entry
Tmz1t_3312 CDS
T00804
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tmz1t_3312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmz03021
]
Tmz1t_3312
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_3312
Enzymes [BR:
tmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tmz1t_3312
Transcription machinery [BR:
tmz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tmz1t_3312
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tmz1t_3312
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ACR01907
UniProt:
C4KC26
LinkDB
All DBs
Position
complement(3630517..3631497)
Genome browser
AA seq
326 aa
AA seq
DB search
MQSNALLKPRIIDVQSTSPVQARVTMEPFERGFGHTLGNALRRILLSSLPGHAPTEVTIE
GVLHEYSTLDGVREDIVDLLLNLKGVVFKLNGRSEVTVRLAKAGEGVVTAADIEVGHDVE
IINPDHVIAHLAPGGKLDMQIKVEEGRGYVPGNSRPENAESKSIGRVVLDASFGPVRRVS
YLVESARVEQRTDLDRLIIDIETNGAVDPEEAIRYAARVLMDQLSVFADLEGTAPERVEA
ASPTIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLASRGLTLGMKLENWPPAGLEKLG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcaatgcactgctgaaaccgcgcatcatcgacgtccagagcacctcgcccgtt
caggcgcgggtgacgatggagccgttcgagcgcggtttcggtcacacgctggggaatgcg
cttcggcgcatcctcctgtcgtcgcttcccggccatgcgccgaccgaagtgacgatcgaa
ggggtgcttcacgagtactccacgctcgacggcgtccgcgaggacatcgtcgatctgctg
ctcaacttgaagggcgtggtgttcaagctcaacgggcgcagcgaggtcaccgtccgtctc
gccaaggcaggcgagggtgtggtgactgcggccgacatcgaggtcggtcacgacgtcgag
atcatcaatcccgaccacgtgatcgcccacctcgcgccgggcggcaagctcgacatgcag
atcaaggtcgaggaaggccgcggctacgtgccgggcaattcgcgtcccgagaacgcggag
agcaagtccatcggtcgcgtcgtgctcgatgcctccttcggtcccgtgcgtcgcgtcagc
taccttgtcgagagcgctcgcgtcgagcagcgtaccgacctggatcgcctgatcatcgac
atcgagaccaacggtgcggtcgacccggaagaggcgattcgctacgccgcccgggttctc
atggaccagctttccgtgttcgccgacctcgaggggacggcaccggagcgcgtcgaggcg
gcttcgccgaccatcgacccggtgctgctgcgcccggtcgacgatctggagctcacggtg
cgctcggccaactgcctgaaggccgagaacatctactacatcggcgacctgatccagcgt
accgagaccgagctgctgaagaccccgaacctgggccgcaagtcgctcaacgagatcaag
gaagtgttggcctcccgcgggctgacgcttggcatgaaactggaaaactggccgccggcc
gggcttgaaaagctcggttga
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