Thauera aminoaromatica: Tmz1t_3678
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Entry
Tmz1t_3678 CDS
T00804
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tmz
Thauera aminoaromatica
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmz03016
]
Tmz1t_3678
Enzymes [BR:
tmz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Tmz1t_3678
Transfer RNA biogenesis [BR:
tmz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Tmz1t_3678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ACR02271
UniProt:
C4KC80
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All DBs
Position
4039321..4041228
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AA seq
635 aa
AA seq
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MFVLYEEDGAFKAGTILADNDATLQVENTHGKRVKLKRAHVLMEFREPGPSDLLARAEAE
AEGLDVEFLWEVCGDDEFAFADFAAEYHGHVPNAVESAALLLRLHSAPIWFHRKGRGRFR
KAPADILQAALAGLEKKRQQAAAIEHMRAELVAGRLPPELAALLPQALYRPDRNRPEIKA
LEAACVDSGLSAARLLLACGALASSYDFHYNRFLFEHFPEGTAFPAIEPPVLPTALPRAE
VAAFSIDDASTTEIDDAFSVTPRAEGGWRIGIHIAAPALGFARGSTLDAVARRRLSTVYM
PGNKITMLPDEIVQTFTLGEGRDCPAVSLYLDITPGLAIVHQESRVELVPIVANLRHHDI
EPVFNDDTVHNGGPDFQWKRELTLLWDLATVLEAGRGKAAGNEDRIDFGFSVDWTEETAD
GPGRVSIGRRLRGSPMDKLVAELMIHANMTWGKLLDTSGIPGLYRAQGGGKVRMTTVAAP
HEGLGVDCYAWSSSPLRRYVDLVNQWQIISVLQGTPPAFAPKSAELMAAMRDFELTYAEY
AEFQRGMERYWCLRWLRQHGRGEVEATVLRENVVRLAEIPLVIRVPSMPLQMPGSRVKLV
VERTDLLDVEVEARFVQTLAEPDPETVDEAGFGFA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctgtatgaagaggacggggccttcaaggccggaaccatcctcgccgataac
gacgccacgctgcaggtcgagaacacccacggcaagcgggtgaagctcaagcgcgcccat
gtgctgatggagttccgcgagccggggccttccgacctgctcgcgcgcgccgaggccgag
gccgaaggcctggacgtcgaattcctctgggaagtgtgcggcgacgacgagttcgccttc
gccgacttcgccgccgaatatcacggccatgttccgaacgcggtcgaatcggccgccctg
ctgctgcgcctgcactcggcgccgatctggttccaccgcaagggacgcgggcgcttccgc
aaggcccccgccgacatcctccaggccgcgctcgccggcctcgagaagaagcgccagcag
gccgccgcgatcgagcacatgcgcgccgaactggtcgccgggcgcctgccgcccgagctc
gccgcgctgctgccgcaggcgctctaccgccccgaccgcaaccgcccagagatcaaggcg
ctcgaagccgcctgcgtcgacagcgggctgtcggccgcgcgcctgctgctggcctgcggt
gcgctcgcctcgagctacgacttccattacaaccgcttcctcttcgagcacttccccgaa
ggcaccgccttccccgccatcgagccccccgtgctgccgaccgcgctgccgcgtgccgag
gttgccgcattctcgatcgacgacgcctccaccaccgagatcgacgacgccttctcggtg
acgccgcgcgccgagggcggctggcgcatcggcatccacatcgccgcacccgcgctcggc
ttcgcgcgcggctcgacgctcgacgcggtcgcgcgccggcgcctgtccaccgtctacatg
ccgggcaacaagatcaccatgctgcccgacgagatcgtgcagaccttcaccctcggcgag
ggccgcgactgtccggcggtgtcgctctacctcgacatcaccccggggctggcgatcgtc
catcaggagagccgggtcgaactcgtgccgatcgtggccaacctgcgccaccacgacatc
gagccggtgttcaacgacgacaccgtccacaacggcggccccgacttccagtggaagcgc
gagctgaccctgctgtgggacctcgccaccgtgctcgaggctggacgcggcaaggccgcc
ggcaacgaggaccgcatcgacttcggcttcagcgtggactggaccgaggagaccgcggac
ggcccgggacgcgtcagcatcggccggcgcctgcgcggctcgccgatggacaagctcgtc
gccgagctgatgatccacgccaacatgacctggggaaagctgctcgatacctcgggcatc
cccggcctgtatcgcgcccagggcggcggcaaggtgcgcatgaccacggtcgccgcgccg
cacgaaggcctcggggtggactgctacgcgtggtcgagctcgccgctgcggcgctacgtc
gacttggtgaaccagtggcagatcatctcggtgctgcagggcaccccgcccgcgttcgcg
cccaagtcggccgagctgatggcggcgatgcgcgacttcgagctcacctacgccgagtac
gccgagttccagcgcggcatggagcgctactggtgcctgcgctggctgcgccagcacggc
cgcggcgaggtcgaggccacggtgctgcgcgagaacgtggtgcgcctcgccgagattccg
ctggtgatccgcgtaccctcgatgccgctgcagatgcccggcagccgggtcaagctcgtc
gtcgagcgcaccgacctgctcgacgtcgaggtggaggcgcgcttcgtacagacgctcgcc
gaacccgatcccgagacggtggacgaggccggcttcggtttcgcgtga
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