Thauera aminoaromatica: Tmz1t_3813
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Entry
Tmz1t_3813 CDS
T00804
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmz
Thauera aminoaromatica
Pathway
tmz03030
DNA replication
tmz03410
Base excision repair
tmz03420
Nucleotide excision repair
tmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tmz1t_3813
03410 Base excision repair
Tmz1t_3813
03420 Nucleotide excision repair
Tmz1t_3813
03440 Homologous recombination
Tmz1t_3813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmz03032
]
Tmz1t_3813
03400 DNA repair and recombination proteins [BR:
tmz03400
]
Tmz1t_3813
Enzymes [BR:
tmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tmz1t_3813
DNA replication proteins [BR:
tmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tmz1t_3813
DNA repair and recombination proteins [BR:
tmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tmz1t_3813
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tmz1t_3813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ACR02402
UniProt:
C4KCZ1
LinkDB
All DBs
Position
complement(4208064..4210883)
Genome browser
AA seq
939 aa
AA seq
DB search
MPTLLLVDGSSYLYRAFHALPDLRNSQGEPTGAIRGVLSMLRRLESDYKAEFRACVFDAK
GKTFRDDWYPEYKSHRPPMPDDLRAQIAPLHEAVRAEGWPLLSVEGVEADDVIGTLTRLA
LERGWEVVISTGDKDLTQLVRPGVRWVNTMSEEVLDEAGVAAKFGVPPERIVDYLALVGD
TVDNVPGVEKCGPKTAVKWLTEYGTLDNLVANADKVGGKVGENLRRHLDFLPLGRKLVTV
ATDVELPVGLDELPARADDKAALRALYERFEFKSWLKDLDGGAESVAASKAASDARRFDR
QENRGQTPISEAATTTPGEGGVCAISADEQMKDLTPVYLPILDWPTFDAWLAKISAAELT
AFDTETTSLDPMAARLVGMSFAVEPGEAAYLPLAHRGAAQLPEAPEQLPLDEVLDRLRPW
FESDRHAKLGQNLKYDAHVLANHGIALRGIAHDTLLESYVLESDKAHDMDSLAKRHLGLA
TIPYTEVCGKGAKQIGFDEVDVARATEYAAEDADVTLRLHQHLCPQLQALPQLEALYREL
EMPVLGVLQRMERTGVLIDPFLLGQHSEELGRRLYTLEGEAHALAGQPFNLGSPKQLGEI
LFGKLGLPVVKKTATGQPSTDEEVLEKLAEDYPLPKLLLEHRGLSKLKSTYADKLPRMVN
PRTGRVHTSFSQATAVTGRLSSSEPNLQNIPIRTPEGRRIRAAFIAPRDHLIVSADYSQI
ELRIMAHLSDDARLLEAFARGEDVHRATAGEVFGVAPAEVTSEQRRYAKVINFGLIYGMS
AHGLAKNLGIERAAAQAWIDRYFARYPGVAEYMDRTRAEAREQGYVETVFGRRLYLPDIR
ASQAGRRAGAERAAINAPMQGTAADLIKKAMIATDAWLASCGLKSKLVLQVHDELVLEVP
GAELETVREELPRLMGGVATLKVPLLVEVGAGDNWDEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctgctgctcgtcgacggctccagctatctctatcgcgccttccatgccctg
cccgacctgcgcaattcgcagggcgagccgacgggcgcgatccggggggtgctgtcgatg
ctaaggcggctggaaagcgactacaaggcagaatttcgcgcctgcgtcttcgacgccaag
ggcaagactttccgcgacgactggtatcccgaatacaagtcccaccgcccgccgatgccc
gacgacctgcgcgcgcagatcgcgccgctgcacgaggcggtgcgggccgagggctggccg
ctgctgtcggtggagggcgtggaagcggacgacgtcatcggcacgctcacccgcctggcg
ctcgagcgcggctgggaggtggtgatctcgaccggcgacaaggacctcacccagctcgtg
cgccccggcgtgcgctgggtcaacacgatgagcgaggaagtgctcgacgaggccggcgtg
gcggccaagttcggcgtgccgcccgagcgcatcgtcgactacctcgcgttggtgggcgac
acggtggacaacgtgccgggcgtggagaagtgcggtcccaagaccgcggtgaagtggctg
accgagtacggcacgctcgacaacctcgtcgccaacgccgacaaggtgggcggcaaggtc
ggcgagaacctgcgcaggcatctggactttctgccgctgggccggaagctggtgacggtg
gcgacggatgtggagctgccggtggggctggacgagctgccggcgcgcgcggacgacaag
gcggcgctgcgcgcgctctacgagcgcttcgagttcaagtcatggctgaaggatctggat
ggcggtgcggagagtgtcgccgcctcgaaggccgcgtccgatgcgcgccgcttcgaccgc
caggaaaatcggggacagaccccgatttccgaggctgcgaccacgacgccaggggagggc
ggggtgtgcgcaatctccgcggatgagcaaatgaaagacctgaccccggtctatcttccc
atcctcgactggccgaccttcgacgcctggctggcgaagatctccgctgccgagctcacc
gccttcgacaccgagaccaccagcctcgacccgatggcggccaggctggtcgggatgtcc
ttcgcggtcgagccgggcgaggcggcctacctgccgctggcgcaccgcggtgccgcgcag
ttgccagaggcgccggagcagttgccgctggacgaggtgctcgacaggctcaggccctgg
ttcgaatccgaccggcacgccaagctcgggcagaacctcaagtacgacgcccacgtgctc
gccaaccacggtatcgcgctgcgcggcatcgcgcatgacaccctgctcgaatcctacgtg
ctggagagcgacaaggcgcacgacatggattcgctcgccaagcgccatctcggcctcgcg
acgatcccttatacggaggtctgcggcaagggtgccaagcagatcggcttcgacgaggtc
gatgtcgcgcgcgccaccgaatacgccgccgaggacgccgatgtcaccctgcgcctgcac
cagcacctgtgcccgcagctccaggccctgccgcagctcgaagcgctttaccgcgagctc
gagatgccggtgctcggcgtgctgcagcgcatggaacgcaccggggtgctgatcgacccc
ttcctgctcggccagcactcggaggagctcggccgccgcctgtacacgctcgagggcgag
gcacatgcgctcgccggccagcccttcaacctcggctcgcccaagcagctcggcgagatc
ctgttcggcaagctcggcctgcccgtggtcaagaagaccgccaccggccagccctccacc
gacgaggaggtgctggagaagctcgccgaggactaccccttgcccaagctcctgctcgag
caccgcggcctgtccaagctcaagagcacctacgccgacaagctgccgcgcatggtcaat
ccgcgcaccggccgcgtgcacaccagcttctcgcaggccaccgcggtcaccggccggctg
tcgagctccgagcccaacctgcagaacatcccgatccgcacgcccgaaggccgccgcatc
cgcgccgccttcatcgcgccgcgcgatcatctcatcgtctcggccgactactcgcagatc
gagctgcgcatcatggcccacctttcggacgacgcccgcctgctcgaagccttcgcccgc
ggcgaggacgtgcaccgcgccaccgccggcgaggtcttcggcgtggcgccggccgaggtg
acgagcgagcagcgccgctacgccaaggtgatcaacttcggtctcatctacggcatgagc
gcgcatggcctggccaagaacctcggcatcgagcgcgccgccgcgcaggcctggatcgac
cgctacttcgcgcgctaccccggcgttgcagagtacatggaccgcacccgcgccgaggcg
cgcgagcagggctacgtcgagaccgtcttcggccgtcgcctctacctgcccgacatccgc
gccagccaggccggccgccgcgccggcgccgagcgtgcggcgatcaacgcgccgatgcag
ggcacggccgccgacctcatcaagaaagcgatgatcgcgaccgacgcctggctggcttcc
tgcggcttgaagtcgaagctggtgctgcaggtgcacgacgagctggtgctcgaggtaccc
ggggccgagctcgaaacggtgcgggaagagctgccccggctgatgggcggcgtcgccacg
ctgaaggtgccgctgctggtggaggtcggcgccggcgacaactgggacgaggcccactga
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