Thauera aminoaromatica: Tmz1t_3824
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Entry
Tmz1t_3824 CDS
T00804
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tmz
Thauera aminoaromatica
Brite
KEGG Orthology (KO) [BR:
tmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmz03019
]
Tmz1t_3824
03009 Ribosome biogenesis [BR:
tmz03009
]
Tmz1t_3824
Messenger RNA biogenesis [BR:
tmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tmz1t_3824
Ribosome biogenesis [BR:
tmz03009
]
Prokaryotic type
rRNA processing factors
Tmz1t_3824
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ACR02413
UniProt:
C4KD02
LinkDB
All DBs
Position
4217903..4219357
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AA seq
484 aa
AA seq
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MSIEFLINFTPQETRVAIVEQGVVQELHVERTASRGIVGNLYLGKVVRVLPGMQSAFIDI
GLERTAFLHVADIWSDRQNGEGARPIEKILTEGQSLMVQVLKDPIGTKGARLSTQVSLAG
RLLVYLPQEKHIGISQRIEDEAGREALRSRLVALVPEDEPGGFIVRTMAESATDAELAAD
IAYLRKLWREISGSTVGLFPPKLLHEDLGLGQRTLRDLVTDETSRIRVDSRENFQKLTAF
AAEYTPQVLPLLEHYSGDRPLFELYSVEEEIQKALARRVDLKSGGYLIIDQTEAMTTVDV
NTGGFVGARNFDDTIFKTNLEASQAIARQLRLRNLGGIIIIDFIDMENVEHREMVLEEFR
KALSRDHTKMSINGFTALGLVEMTRKRTRESLAHLLCEPCPTCSGRGEVKTARTVCYEIL
RELLREARQFNAREFRVLAAPNVIDLFLDEESQSLAMLSDFIGKKVSLHAEGSYTQEQYD
IVLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaattcctcatcaacttcaccccgcaggaaacccgcgtcgcgatcgtcgag
cagggcgtggtgcaggagctgcacgtcgagcgcaccgccagccgcggcatcgtcggcaac
ctctacctcggcaaggtcgtccgggtgctgcccggcatgcagtcggccttcatcgacatc
ggcctcgagcgcaccgccttcctgcacgtggccgacatctggagcgaccgccagaacggc
gagggtgcgcgtccgatcgagaagatcctcaccgaaggccagagcctgatggtgcaggtg
ctcaaggacccgatcggcaccaagggcgcacgcctgtccacccaggtcagcctcgccggc
cgcctgctcgtctacctgccgcaggaaaagcacatcggcatctcccagcgcatcgaggac
gaggccgggcgcgaggcgctgcgcagccggctggtcgcgctggtgccggaagacgagcca
ggcggcttcatcgtgcgcacgatggccgaatccgccaccgacgccgagctcgccgccgac
atcgcctacctgcgcaagctgtggcgcgagatctccggctcgaccgtgggcctgttcccg
ccgaagctgctgcacgaggacctcgggctgggccagcgcacgctgcgcgacctcgtcacc
gacgagacctcacgcatccgcgtcgactcgcgggagaacttccagaagctcaccgccttc
gccgccgagtacacgccccaggtgctgccgctgctcgagcactacagcggcgatcgcccg
ctcttcgagctctacagcgtggaagaggagatccagaaggcgctcgcccgccgcgtcgat
ctcaaatccggcggctacctgatcatcgaccagaccgaggcgatgaccaccgtcgacgtc
aacaccggcggcttcgtcggcgcgcgcaacttcgacgacaccatcttcaagaccaacctc
gaggccagccaggccatcgcccgccagctgcgcctgcgcaacctcggcggcatcatcatc
atcgacttcatcgacatggagaacgtcgagcatcgcgagatggtgctggaggagttccgc
aaggcgctgtcgcgcgaccacaccaagatgagcatcaacggcttcaccgcgctcggcctg
gtggagatgacgaggaagcgcacgcgcgaatccctcgcccacctgctgtgcgagccctgc
cccacctgcagcggccgcggcgaggtcaagaccgcgcgcacggtgtgctacgagatcctg
cgcgagctgctgcgcgaggcacgccagttcaacgcccgggagttccgcgtgctcgccgcg
cccaacgtgatcgacctcttcctcgacgaggagagccagtcgctggcgatgctgtcggac
ttcatcggcaagaaggtctcgctgcacgccgagggcagctacacccaggagcagtacgac
atcgtgctgctgtga
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