Thermotoga neapolitana: CTN_0428
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Entry
CTN_0428 CDS
T00847
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tna
Thermotoga neapolitana
Brite
KEGG Orthology (KO) [BR:
tna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tna03032
]
CTN_0428
03400 DNA repair and recombination proteins [BR:
tna03400
]
CTN_0428
Enzymes [BR:
tna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CTN_0428
DNA replication proteins [BR:
tna03032
]
Prokaryotic type
DNA Topoisomerases
CTN_0428
DNA repair and recombination proteins [BR:
tna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CTN_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_3
DUF3452
Motif
Other DBs
NCBI-ProteinID:
ACM22604
UniProt:
B9KC58
LinkDB
All DBs
Position
complement(426859..428757)
Genome browser
AA seq
632 aa
AA seq
DB search
MSKKKKYIIVESPAKAKTIKGILGPEYEVFASMGHIVDLPKSKFGVDLKNDFEPQFTVIK
GKEKIVEKIKAISKVGEIFIASDMDREGEAIAWHVARLTNTLGKRNRIIFSEITPRVIKE
AVKNPRKIDMNKVHAQLARRILDRIVGYSLSPVLWKNFKSNLSAGRVQSATLKLVCDRER
EILRFVPKKYHRVVVKFHGLEAEMITKEKTFLEEDVLKELQSIEELVVEEKTVSRKKFSP
PDPFKTSSLQQEAYAKLGFSVAKTMLLAQQLYEGVETKEGHIAFITYMRTDSTRVSDYAK
EAARELIEKDFGKEYIGTGRRKKSRTARIQDAHEAIRPTDVFMTPEKISKYLNPDQRKLY
ELIWKRFFASQMKPSEYEETRFVLRSKDGKYRFKGSILKRIFDGYERVWKTERNVGDFPF
EEGEIVKPVEVEIKELETKPKPRYTEGTLVKEMERLGIGRPSTYASTIKLLLSRKYVKKI
RGYLYPTVIGSVVMDYLEKKYADIVDISFTAEMEKELDEVEQGKKTDKVVLQDFYRTFSK
VFNENDRIIINYPTDQKCSCGKDMVLSFGRYGFYLKCECGKSRSVRNDEVAVIENGKMFI
GRKNDEDSTSDGGNVKRKRSLTEKRRKGKKSS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaaagaagtacataatagtggaatctccggcgaaggcaaagacgataaag
ggaattctggggcccgagtacgaggttttcgcttcgatgggacacattgtggaccttcca
aagagcaaattcggtgttgatttgaagaacgactttgaaccacagttcaccgtgataaaa
ggaaaggaaaagatcgtcgaaaagataaaggctatttcgaaagtgggagagatattcatc
gcctccgacatggacagagaaggtgaagccatcgcatggcatgtggccagactcacgaac
acccttggaaagagaaacagaatcatcttctctgagatcacccccagggtcataaaggaa
gcggtcaaaaatccccggaaaatagatatgaacaaggttcatgcccagcttgcaaggagg
attctggatagaatcgttggctactctctgagccctgtgttgtggaagaatttcaaatcc
aacttgagcgccggtagagtacagtctgccactttgaaactcgtgtgtgaccgggaaagg
gaaatactgagatttgtaccgaagaaataccatcgcgttgtcgttaagttccatggtctg
gaagccgagatgataacgaaggaaaagacctttctggaagaggatgtactcaaagagctg
cagtccatagaggaactggttgtggaggaaaagaccgtctccagaaagaagttctcacca
ccggatcccttcaagaccagttcactccaacaggaagcctacgcgaaactgggtttttct
gtagcaaagaccatgttactcgcccagcagctgtacgaaggagtggagacgaaagaaggt
cacatcgctttcatcacctacatgaggacggactccacccgagtttcagactacgctaaa
gaggccgctcgtgagctgatagagaaagattttggaaaggaatacatcggaactggaaga
agaaaaaagagcaggactgccaggatacaggatgctcatgaagccatacgccctacggat
gttttcatgacgcccgaaaagatcagcaagtatttgaacccagatcagagaaagctttat
gaactgatatggaaaaggttctttgcttctcaaatgaaaccctcagagtacgaagagact
cgctttgtgttgagatcgaaagacgggaaataccgattcaaaggttcgattctgaagagg
atcttcgatggttacgagagagtatggaaaacggagaggaacgtcggtgattttcccttc
gaagagggtgagatcgtaaaaccggtggaagtggagataaaggaactggaaacaaagcca
aaacccagatacactgaaggtactctggtgaaggaaatggaaagactcggaataggacgc
cccagcacgtatgcatctacgataaaacttcttctttccagaaaatacgtgaagaaaatc
aggggatacctctatcccacggttatcggaagtgttgtcatggactacctggagaaaaag
tacgccgacatcgtggatatttctttcaccgccgagatggagaaagaactcgacgaggta
gaacagggaaagaaaacagacaaagtagttttacaggatttctatcgaaccttttcaaag
gtcttcaacgagaacgacaggatcatcatcaattacccaacggatcaaaaatgttcctgt
ggaaaggacatggttctttcttttggaaggtatgggttttacctgaagtgtgaatgtgga
aaaagcagaagtgtaagaaacgatgaggttgccgtcatagagaacggaaagatgttcatc
gggaggaagaacgatgaagatagcacttctgatggggggaacgtcaagagaaagagaagt
ctcactgagaagcggagaaagggtaaaaaaagctcttga
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