Thermotoga neapolitana: CTN_1335
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Entry
CTN_1335 CDS
T00847
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tna
Thermotoga neapolitana
Pathway
tna03420
Nucleotide excision repair
tna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTN_1335
03430 Mismatch repair
CTN_1335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tna03400
]
CTN_1335
Enzymes [BR:
tna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTN_1335
DNA repair and recombination proteins [BR:
tna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTN_1335
MMR (mismatch excision repair)
Other MMR factors
CTN_1335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_11
DEAD
ResIII
HEPN
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACM23511
UniProt:
B9K978
LinkDB
All DBs
Position
1294728..1296677
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AA seq
649 aa
AA seq
DB search
MMKEYRIKPKKTDLSFLEDLDEEQRKAVVESEGRCIVIAGPGSGKTRVITYKIAYLLANG
VDPSRILLVTFTRAAAREMVERAKMVTGRELSEMLAGTFHHVCNYFLRKYAPYVGLDRNY
SILDREDSESLMRHARSKFLERKGREERKNFPQPSVLMSIYSYMRNTLKSLRESIIVKNP
KFLDFKEEIAEIFDLYEQEKRSQNVVDYEDLLFFVYRLFEEHREIRDREAERFLWVLVDE
FQDTNYVQYRMIEHLSSRHGNVLAVGDDAQSIYSFRGARYENVEDFIKVPGTKIFKIQTN
YRSTESIVKFINAMLPTRAVPKVLKPVRKDGMKPVVVKTWDRYEEARFVSQRILELFEEG
FKPEEIAVLYRSHSHSLELQMELARSRIDFRVLSGPRFTESAHVKDVLSFLRIVQNPRDK
SAWLRAAKLFYGIGDRTASKIADLASVYVEEGLDPFEELKKVNFSGEYARFMEILDHLKK
MELPGEMIEYVLTSFYSEYLEARYPDFREREMDIERLVEIASRYTDLENFLTDLAVTEDV
EIQREAFQKEGKVTLTTVHQAKGLEWRVVFVISVNPGDFPNYFAISEGNLDEEERIFYVA
ITRAKEQLYISYQVTGASYPYRGNRFIMRSGENFIDRIPPDLVEMWEVR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaaagagtacaggataaaaccgaagaagacggacctttcgttcctggaagatctc
gatgaagaacagagaaaagcggttgttgaatcagaaggaaggtgtattgtaatagcggga
ccgggatctggaaaaacccgtgtcatcacctacaagatagcctaccttcttgctaacggt
gtggatccctccagaatccttcttgtcacgttcacaagagccgccgcaagagagatggtg
gagagggcaaagatggtgacgggaagagagctttcagaaatgctcgccggaacgtttcat
cacgtgtgcaattacttcttgagaaagtacgcaccgtacgttggactggacaggaactat
tccatcctggacagagaagactcagaaagcctgatgagacacgcaagaagcaaatttctg
gaaagaaagggaagggaagaaagaaaaaactttcctcagccttctgttttgatgtccata
tactcctacatgagaaacacactcaaatctctgagagaaagcatcattgtgaaaaaccca
aaatttctggatttcaaggaagagatcgctgagatctttgacctctacgaacaggaaaaa
cgctctcaaaacgtggtggattacgaggatcttctttttttcgtttacagactcttcgaa
gagcacagagagatacgggacagagaagcagagaggtttctgtgggttctggtggatgag
tttcaggatacaaactacgtccagtacaggatgatcgagcacctgtcttccagacacgga
aacgttctggcggtgggggatgatgcgcagagcatctactctttccgtggagcaagatac
gaaaacgtggaagacttcataaaggttccgggcacaaagatcttcaagatccagacgaat
tacagaagtacagaaagcatcgtgaagttcataaatgcgatgcttccaaccagggccgtt
ccgaaggttctgaagcctgtgagaaaagacggtatgaaacccgttgtggtcaagacctgg
gacagatacgaagaggcacgttttgtgtctcagcgaatcctggagctcttcgaagaggga
ttcaaacccgaagaaatagcggttctctacagatcacactcacattctctggaacttcag
atggaactggcaagaagcaggatagacttcagggttctttcggggccgaggttcaccgaa
agcgcacacgtgaaggacgttctctccttcttgaggatagttcagaatcccagggacaaa
tccgcctggttgagggctgcaaagctcttttacggtatcggagacaggacagcatccaag
atcgcagaccttgcgagtgtgtacgtggaggagggactcgatcccttcgaagaactgaaa
aaggtgaacttctccggtgaatacgcgagattcatggaaattcttgatcatctcaaaaag
atggaacttccgggagagatgatagaatacgttctcacttccttctactccgaatacctt
gaagcgcggtatcctgacttccgtgaaagagagatggacatagagagactggtcgaaata
gcctcccgttacacagatctggaaaatttcctgacggaccttgccgtgacggaggacgtt
gagatacagagagaagcctttcagaaggagggaaaggttaccctcaccacggtccatcag
gcaaagggtctcgagtggagagtagtctttgtcatatccgtgaatccgggagactttcca
aactattttgcgatctcggagggaaaccttgacgaggaagagaggatcttctacgtggcc
ataacgagagccaaagagcaactttacatctcctaccaggtcacgggtgcttcgtatccc
tatcgcggaaacagattcatcatgagaagtggagagaacttcatcgacaggattcctcct
gatcttgtggagatgtgggaagttagatga
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