Pyrobaculum neutrophilum: Tneu_0694
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Entry
Tneu_0694 CDS
T00682
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tneu_0694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tne03021
]
Tneu_0694
Transcription machinery [BR:
tne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Tneu_0694
Prokaryotic type
Archaeal type
TFB
Tneu_0694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
HTH_11
Desulfoferrod_N
Ribosomal_S27e
ORC6_2nd
Zn_ribbon_LysW
Lar_restr_allev
Zn_Ribbon_Prim
FtrD-like
RH_dom
A2L_zn_ribbon
ORC6
Motif
Other DBs
NCBI-ProteinID:
ACB39633
UniProt:
B1YCX0
LinkDB
All DBs
Position
complement(621193..622194)
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AA seq
333 aa
AA seq
DB search
MTSPNPPSSGKPLKLRINRDSEGYLSLVTDTGEVYRCPICGNDKFIYNYERGEVVCIVCG
AVVQEQLLDLGPEWRAFTSEERGQRARTGAPLTRLISEALTTVIDWRDKDVSGKELDIKR
KLEVIRLRKWQTRARVQTSYERNFIQAAQELERLRSSMGIPRPCIEQALEIYRQALEKEL
VRGRSVEAMAAAALYMACRMMKMPRPLDELVRYTKASRREVARCYRLLLRELNVKVPISD
PTLYISRIAEQLKLSGEVVKTAIDILQKAKKAGITAGKDPAGLAAAAVYIASLMHGDNRT
QKDFAVAAGVTEVTVRNRYKELAKALNIKVPVK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccaacccgccatcctctgggaaaccccttaagctacgtataaacagagat
agcgagggctatttaagccttgtcacggacaccggagaggtataccggtgtcccatatgt
ggaaacgacaagttcatctacaactacgagagaggggaggtggtctgtatcgtatgcggc
gccgtggtacaggagcagttgctagacctagggcccgagtggagggccttcacctcagag
gagagaggccagagggcccgcaccggcgcccctctaactaggcttatctcggaggctctt
accacggtgatagactggagagataaagacgtctccggcaaagagctagacataaaacgc
aagctggaggtcattaggctaaggaagtggcagacgagggctcgcgtccagacctcctac
gagaggaacttcatacaggcggctcaagagctggagaggctaaggagctccatgggtata
ccgaggccatgtatagagcaagccctagagatatacagacaagcgcttgagaaagagctc
gtcagagggaggtccgtggaggccatggccgccgccgctctatacatggcatgccgcatg
atgaagatgccaaggccgcttgacgagctggtgaggtacacaaaggcctccaggagggag
gttgcgcgatgctaccgcctactcctacgcgagctcaacgtaaaagtgccaataagcgat
cccacgctctacatctccaggatagcagagcagcttaaactaagcggggaggtggtgaag
acggccatagacatattgcagaaggccaaaaaagccggcatcaccgcgggcaaagacccg
gcaggtttagcggccgctgccgtgtatatagcctctcttatgcacggcgacaacaggaca
cagaaggacttcgcagtggccgctggagtcaccgaggtcacggtgagaaacaggtacaag
gagcttgcaaaggccttaaacataaaggtcccagtcaaatag
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