Pyrobaculum neutrophilum: Tneu_0898
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Entry
Tneu_0898 CDS
T00682
Name
(GenBank) DNA-directed RNA polymerase subunit E, RpoE2
KO
K15171
transcription elongation factor SPT4
Organism
tne
Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tneu_0898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tne03021
]
Tneu_0898
03019 Messenger RNA biogenesis [BR:
tne03019
]
Tneu_0898
Transcription machinery [BR:
tne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Tneu_0898
RNA polymerase I system
Tneu_0898
Messenger RNA biogenesis [BR:
tne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Tneu_0898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
UPF0547
Zn_ribbon_15
Zn_Ribbon_1
HypA
Zn_ribbon_3
Zn_Ribbon_TF
zf-RING_4
NRDD
DUF1451
Zn_ribbon_NUD
DUF7575
Motif
Other DBs
NCBI-ProteinID:
ACB39835
UniProt:
B1YDH2
LinkDB
All DBs
Position
795854..796075
Genome browser
AA seq
73 aa
AA seq
DB search
MSARRRTLPGYKACRQCKLVVPEDAKQCPNCGSEEFVGRWRGMIAVIEPAKSCIAKRLGI
EKPGIYALELVEE
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaggaggagaaccctcccggggtacaaggcctgtaggcagtgcaagctggtg
gtccccgaagacgcgaagcagtgccccaactgcggctccgaggagttcgtgggcagatgg
aggggcatgatagcggtgatagagcccgccaagtcctgcatagccaagaggctcggcatc
gagaagccgggcatctacgccttggagctggtggaggagtag
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