KEGG   Pyrobaculum neutrophilum: Tneu_1333
Entry
Tneu_1333         CDS       T00682                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tne  Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:tne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tne03400]
    Tneu_1333
Enzymes [BR:tne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Tneu_1333
    5.6.2.6  RNA 3'-5' helicase
     Tneu_1333
DNA repair and recombination proteins [BR:tne03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Tneu_1333
SSDB
Motif
Pfam: DEAD Helicase_C DEAD_assoc WH_Lhr ResIII Cas3-like_C_2 HypA TiaS_TCKD Zn_ribbon_8
Other DBs
NCBI-ProteinID: ACB40259
UniProt: B1Y930
LinkDB
Position
complement(1192683..1195421)
AA seq 912 aa
MVFDLLHPRLQAAIRELGYLEPTPAQERGIPAVLSGSHVLIIAPTGFGKTEAALFPIISR
MLEGGGRALYITPLRSLNRDLLRRLYALAEALGLSMAVRHGDTPESERRLLATRPPDILI
TTPESLQILLLHRRLRRSLSSVRFVVVDEVHELVGSKRGVQLAVGLERLVELAGEFQRVG
LSATVGNPALVAEFLGGVGRRVEIVDVSGEKKFEVEVVLPTPTDEDYIDAEKLDATPEAV
ARVKKVAEFVKSSGGAVLVFTNTRDGAEFLASRLRSLLGSVVEVHHSSLSREHRVSVEER
LKRGELKAVVATSSLELGIDIGEVDLVIQYGSPRQVAKLIQRVGRSGHRLGQISRGVVVA
SDLEDMLESEVISAMALARLIVDDVEYHENALDVLVHQIVGIALEARVEGRDIDVGYVMR
VVKRAHPYRNLTEDDLKLVLDFAERHRLLRGLRPRRGSVRYYYEGVSTIPDEKSYRAVDE
TTGRVVGQLDREFVYAIEPGTKIVLSGRVWVFSRKEGETVYLYPDFDITGALPSWIGEQI
PVPRQVAQEVCTKRADLLREALEGRGDLEADLEGLEPDLVPMSDRLHIHIVGGKYAVLHS
CLGSKGNEALGLYLSHALSGYVGPVGYRADAYRVLLIFRDHVPVNALEEMLKRPPEFIFR
TLRNAVKSSRMFRYRFLQVARRVGLVSKEAEDVPSKLVDVYMDDVPGIETLNEIFVEKLD
VKALLDLVERISGGKLQIVVRRLAKPTLLERPILEEALRLDFTFRGLSRETLADLARKRI
LNKFATLLCLNCGWTFTARASMIPEDVSCQRCGMRALAVVKGVDLEKARQVLNKHKLRQK
LSAEERRLLEHLQQSASIVLEHGKTGVIIQLAHGVGPKTAIRVLNKVFEGADLWSAILDA
ERQYSTTRAFWD
NT seq 2739 nt   +upstreamnt  +downstreamnt
gtggttttcgatctgttgcacccccggctacaagcggcgatcagggagctgggctatctg
gagcccacgccggcgcaggagagggggatacccgcagttttatcgggttcccacgtttta
ataatcgcgcccaccggctttgggaaaacagaggcggcgctcttccccataatttccagg
atgttggaggggggcggccgcgcgctctatataacgccgttgcgctcgctaaaccgcgac
ctcctccgccggctctacgcgcttgcagaagcccttgggctatcgatggcggttagacat
ggggatacccctgagtctgagagaagattgcttgcgacacgtccgccggatatcttaatt
acgacgccggagtccctccagatacttctcctacaccgccgcctgcggcggagcctaagc
tccgtgcgtttcgtagttgtagacgaggtacacgagctcgtggggagcaagcgaggtgta
cagctagcggtggggcttgaacgtctcgtggagctggcgggcgaattccagagggttggg
ctctccgcgacggtgggcaacccggcgcttgtggctgagttcctagggggcgtcggtcga
agggtggagatcgtcgacgtgtcgggggagaagaagttcgaggtagaggtggttttgcct
acgccgaccgacgaggactacatagacgccgagaagctagacgcgacgcccgaggccgtt
gccagagttaagaaagtcgccgagtttgtgaaatcctcgggaggcgcagtgttggttttc
acgaatactagagacggcgctgagttcttggcgtcaaggctgaggagcctcctaggttca
gtggttgaggtccaccactcgtctctgtctagggagcacagggtttccgtcgaggagcgg
ctcaagagaggcgagctgaaggccgtggttgccacctccagcctagagctggggatcgac
ataggcgaggttgacctcgttattcaatacggctcgcctcgccaggtggctaagctgatc
cagagagtaggcagaagcggccacaggctgggacagatctcgcggggagtcgtagtggcg
tccgatctagaggacatgctggagtctgaggtcatatccgccatggccctggcgcgtttg
atagtagacgatgtggaataccacgaaaacgcgcttgacgtcctcgtgcaccagatcgtc
ggcatagcgctggaggctagagtagaggggagagatatcgacgttggatacgtcatgcgg
gtggtgaagagggcccacccctacaggaacttgaccgaggacgacctcaagctcgtcctc
gacttcgcggagagacataggttgctgagggggctgaggcccaggaggggaagcgtgcgt
tactactacgagggggtgtccacgataccagacgagaagagctatagggcggtggacgag
accaccggcagagtcgtggggcaactagatagggagttcgtatacgctattgagccaggc
actaagattgtgttgtcggggagggtgtgggtcttttccaggaaggaaggcgagacggtg
tatctataccccgatttcgacatcacgggagccctcccctcgtggataggcgagcagata
ccggtcccgcggcaggtggcacaggaggtatgcacaaagcgtgcagatctcctcagggag
gctctagagggccggggcgatctggaggcggatctcgaaggtctagagccggatctcgtg
ccgatgtcggacagattacatatacacatcgttggtgggaaatacgccgtattgcacagt
tgcctagggtctaagggtaacgaggcgctgggtctctacctatcccacgccctctcgggg
tacgtgggaccggtcggctatagggcagacgcctacagagtcctgctcatctttagagac
cacgtgcccgtaaacgcgctcgaggagatgcttaagagaccccccgagttcatctttaga
acgttgagaaacgccgtgaaaagctccaggatgtttaggtatagatttctccaagtggct
aggagggttggtctagtgtcgaaggaggcggaggatgtcccgtctaagttagtagacgta
tatatggacgacgtacctgggatagagacgttgaacgagatctttgtggagaagctggat
gtgaaagcgttgctggatcttgtggagaggatttccgggggaaagctacagatcgtggtg
aggcgtttggctaagcccacattgttggagaggcccattttagaagaggcgcttaggctg
gacttcaccttcagagggctttcaagggagaccctcgccgatttggcgaggaagaggata
ttgaacaaattcgcaactcttctgtgtctcaactgcggctggactttcacagcccgcgcg
tcaatgatcccggaggacgtcagctgtcagaggtgcgggatgagggctctggccgtcgtg
aagggggtggacctggagaaggcccggcaggttttaaacaagcacaagcttaggcagaag
ctcagcgccgaggagaggaggctcctggagcatctacagcagagcgcctcaattgtgcta
gagcatggaaaaaccggagtcataattcagctagcgcacggcgttggcccaaaaaccgcg
attagagtgttaaacaaggtcttcgaaggcgccgacctctggagcgccatcttggacgcc
gaaagacagtattccacgaccagggccttctgggactaa

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