Pyrobaculum neutrophilum: Tneu_1435
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Entry
Tneu_1435 CDS
T00682
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tne
Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tne03016
]
Tneu_1435
Enzymes [BR:
tne01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Tneu_1435
Transfer RNA biogenesis [BR:
tne03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Tneu_1435
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ACB40360
UniProt:
B1Y9D1
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All DBs
Position
1275654..1276205
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AA seq
183 aa
AA seq
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MSGVLRGLAVVVQDVELARALYREGFYGRFLGYDKVKRDEVDKVSAPLILALYEALYLAE
RGRIKVVAEDGAEIPPEKLAELGRGMIRNFDDVYKIYKYFRDLGYVVKSGLKFGALFSVY
EKGPGIDHAPMVVVFLEPDRGISATDITRGGRLGHSVKKTFTLATVLRQTGEVVLLGFSW
AKL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagttttaagagggctcgccgtagttgtccaagacgtagaactcgccagggcg
ttatacagggagggcttctacggcagattcctcggctacgacaaagttaagcgagacgag
gtggacaaggtatctgccccgctaatcctagccctatacgaggcgctctacctagccgag
agggggaggatcaaggttgtggctgaagacggagccgagatccctccggagaagctcgcg
gagcttgggagagggatgatcagaaacttcgacgacgtatacaagatatacaagtacttc
cgggacctcggctacgtcgtaaaaagcgggcttaaattcggcgcgttgttctcggtctac
gaaaagggccccggcatagaccacgcgccgatggtggtggtttttctagagccagacagg
gggatctcggccacggatataacgcgtggcggcagactgggccacagcgtgaaaaagacc
tttaccctggcgactgtgctccgacagaccggagaggtggtactcctcggcttttcctgg
gctaagctttaa
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