Pyrobaculum neutrophilum: Tneu_1444
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Entry
Tneu_1444 CDS
T00682
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tne
Pyrobaculum neutrophilum
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tne03400
]
Tneu_1444
DNA repair and recombination proteins [BR:
tne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tneu_1444
Archaeal homologous recombinant proteins
Tneu_1444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_13
AAA_21
BLOC1_2
ATG17_like
AAA_29
DUF1664
Laminin_II
Phage_scaffold
DivIC
DUF349
COG6_N
Rad50_zn_hook
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ACB40369
UniProt:
B1Y9E0
LinkDB
All DBs
Position
1280729..1283116
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AA seq
795 aa
AA seq
DB search
MWRIERIELENFRSYKGRHELRIGDAAVFWGRIGAGKTSILYAIEYALFGRQLEVKERVA
RLVDLINADAQEARVALELRKGGELLRVERRLGRRGGERVVLHYGGVEHRGDQAEEKLAE
LLGADEDVYERLVYISHRTLEGFIYGTTQKRALSVDRLFGIDVVDGVIKAVSTYEKALLN
VAEDLRKRLASYEKYREVIKRYGGYRGVEARLGAVEQELEALKKREEALSAEAADLAKRR
TAYLEKIRENEGLLLEYYRAKSELEVLESDAGGDVDVSAVEKIREALREALEEYEHLLGR
ELAERLEKAADLESLSTAMSEAYEALLKLAGELEAQISETKKTYEQLLARAKRLDEEVRD
AEAKLKRLEKSYNRFKELQRSFQSLDAARAALAEVRKRLDEVERSVAFHSALRTVALYTA
ETGAERCPLCGSPIDRRAALRVADEVEGKFGELIREAEALREKVRELEKAVDEMDALSGE
VAEYLATKAKAQELALEREEVVKRVLQAEKSVKQLEKKAERLRALLARIDKRIIAEAVAK
YGRALRARELRRRVKELEEALAKAGVGGETLDVEMRWREVVADLEKTSSRMAELHREKTS
LEEVVREVGGDAESLKKKLDSALYAYGRLQELKAKLELAKVNARARLLEVARSKFNEVFL
SLYKYGDLVGVNADLEQRRGYYEFYAVTPTGERYGISKLSDGQRLSIALALALALRDVSN
IHIGFVIFDEPIPYVDVNIRKAFVDLVHALSNKYQIIVATQSREFADLIKNALNAKLYSV
AKRESSEVREERDQS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggatagagaggattgagttggagaacttcagatcctacaaaggcagacatgag
ctacgcataggcgacgccgcggtcttctggggcagaataggcgctggcaagacatcgata
ctgtacgcaatagagtacgctttgtttggtagacagcttgaggtgaaggaaagagttgcg
aggcttgtcgatctaatcaacgcagatgcgcaagaggctagggtggcgctggagttgcgg
aaaggcggcgagttgctgcgcgttgagcgaaggctggggaggagaggcggcgagagggtt
gtcctgcactacggcggcgtagaacaccggggggatcaagccgaggagaagctggcggag
ctcctgggggctgacgaagacgtctacgagcgcctagtctacatatcgcataggacgctt
gagggcttcatatacggcacaacgcagaagagggctctctcggtggaccgtctcttcggt
atagacgtcgtagacggcgtgatcaaggccgtgtctacatatgagaaagccctgctcaac
gttgcggaggatctcaggaagaggcttgcgtcgtatgagaaatacagggaggtcatcaag
cggtatgggggctacagaggcgtagaggctaggctgggggctgttgagcaagagcttgag
gcgttgaagaagagggaggaggcgctttcggccgaggccgctgacctcgcgaagaggagg
accgcctacctggagaagatcagagaaaacgagggccttctcctggagtactacagagcg
aagtcggagcttgaggtcttggagtcagatgccggcggagatgtcgacgtatctgcggtg
gagaagataagggaggcgcttcgggaggcactagaggaatacgaacatctgttgggccgc
gagcttgccgagaggctggaaaaggcggcagatttagaatctctatccacggccatgtcc
gaggcctacgaggcgctcctcaagctggcgggcgagttggaggcgcagatctcggagact
aagaagacgtatgaacaattgctggctagggcgaagcggcttgacgaagaggtgcgggac
gccgaggctaagctcaagaggttggagaagtcgtacaaccgctttaaggagcttcagcgg
tctttccagtctctagacgccgcaagagcggccctcgctgaggtgaggaagcggcttgac
gaagtggagagatccgtggcgtttcactcggcgttgagaacagtggctttgtacacggcg
gagactggggctgagcggtgtccgctgtgtggctcgccgatagatcgcagagccgcgcta
cgggttgctgatgaggtagaggggaaattcggcgagcttatccgggaggcggaggccctc
agggaaaaggtaagagagcttgagaaggccgtagatgagatggacgcgttaagcggcgaa
gtcgcggagtacctagccacgaaggcaaaagcgcaggagctcgcgcttgagagggaggag
gtggtcaagagggttctccaggcggagaagtctgtgaaacagctggagaagaaggcagag
aggctccgggccctcctcgcgaggatagataagcgcattatagcagaggccgtggctaaa
tacggaagagcgctgagggctagggagctccgccgtagagttaaagagctggaggaggcg
ttggcaaaggcgggggtggggggcgaaactctcgacgtggaaatgcggtggagagaggtt
gtggccgacttagaaaaaacgtcgagccgcatggcggagcttcacagggagaagacgagc
ctggaggaggtggtgagggaggtaggcggcgacgccgaatcgctgaagaagaagctggac
tccgccctatacgcctacggcagactccaggagctgaaggccaagctggagctggctaag
gtaaacgccagggctaggttgctggaggtggcaagatcgaagttcaacgaggtttttctc
tcgctctacaaatacggagatttagtcggcgtcaacgccgacttagaacagcgcaggggg
tactacgagttctacgcggtgacgcccacgggggagcgatacggcatttcaaaactgagc
gacgggcagaggctctccatcgccctcgccctagccctggccctccgtgatgtctcgaac
atccacataggctttgtgatcttcgacgagccgataccatacgtagacgtcaacataagg
aaggccttcgtagatctggtacacgctctatcaaacaagtaccagataatcgtcgcgacg
caatccagggagttcgcagatctaataaaaaacgcgctaaacgccaagctctactcggtg
gcgaagagggagagctccgaggtgagggaagagagagatcagagctaa
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