Pyrobaculum neutrophilum: Tneu_1563
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Entry
Tneu_1563 CDS
T00682
Name
(GenBank) Zinc finger TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
tne
Pyrobaculum neutrophilum
Pathway
tne03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tne00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Tneu_1563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tne03021
]
Tneu_1563
Transcription machinery [BR:
tne03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Tneu_1563
Prokaryotic type
Archaeal type
TFB
Tneu_1563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
Zn_ribbon_tTFIIB
ZNF512_C2HC
Zn_ribbon_3
DUF7577
Zn_ribbon_8
Zn_ribbon_LysW
Zn_ribbon_RRN7
HTH_24
DUF7351
Cyclin_C
ORC6_2nd
Ribosomal_S27e
DUF1539
Zn_ribbon_Elf1
Lar_restr_allev
Cys_rich_CPXG
Desulfoferrod_N
Motif
Other DBs
NCBI-ProteinID:
ACB40487
UniProt:
B1Y9T7
LinkDB
All DBs
Position
complement(1386226..1387122)
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AA seq
298 aa
AA seq
DB search
MTRRLIFELEEYRCPTCGAVNDVAVDYERGQVVCRSCGTVLRESIADLGPEWRRPESSRA
HAGPVGSSLGDIEYGNIKIMDKLKAISLKKFARPLTTPLERVEIDIREFLDSAREKLNLH
PSIVEETVQLYKRLYEAGYRAPRLEGYAAALLFTLKSRGVAAVTPKTLYEQLGVDRSAFQ
SAYMELLKVANSLGLRPPRTDPKIYIPKIVAALGIGDEKTAEVLRIAVDILRYIMSSPRI
RNGRKPQVLAAAAVYYACYLAGVEVTQKELAKAADSTEGPVRELLKELSERLYIEITL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggaggctgatttttgagctggaggagtaccgttgcccaacgtgcggcgcggta
aacgacgtcgccgtcgactacgagcgcggccaggtggtgtgtagaagttgtggcaccgtc
ctgagagagagcatcgcagatcttgggccagagtggaggaggcccgagtcctctagagcc
cacgcggggccggtggggtcctcgctgggggatatagagtacggcaatataaagatcatg
gacaagctgaaggcgataagcctaaagaagttcgccaggcctctcacgacgcccctcgag
cgcgtggagatagacatcagggagtttctggactccgccagggaaaagctaaacctacac
cccagcatcgtcgaggagaccgtgcaactctacaagaggctgtatgaggcggggtaccgt
gccccccggctggagggctacgccgctgctttgctctttacgctgaagagcagaggcgtc
gccgccgtcacgcctaagacgctctacgaacagctgggcgtagaccggtccgccttccag
tcggcgtacatggagttgctgaaggtagcgaacagccttggcttaaggccaccgcgtaca
gatcctaagatctacatacccaagatcgtggcggcgctcgggattggggatgagaaaacc
gcggaggttctccgcatcgccgtggatattctccgctacataatgtcgtctccgcgtatt
agaaacgggaggaagcctcaggtcctcgcagcggccgcggtgtactacgcctgctatcta
gcgggggtggaggttacccagaaggagctcgcaaaggcggcggactccaccgagggccct
gtcagagagctcctgaaggagctctccgagaggctctacatcgagataacgctttag
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